New models for human disease from the International Mouse Phenotyping Consortium

被引:48
|
作者
Cacheiro, Pilar [1 ]
Haendel, Melissa A. [2 ,3 ]
Smedley, Damian [1 ]
Meehan, Terrence
Mason, Jeremy
Mashhadi, Hamed Haseli
Munoz-Fuentes, Violeta
Tocchini, Glauco
Lloyd, Kent K. C.
McKerlie, Colin
Bower, Lynette
Clary, Dave
Nutter, Lauryl M. J.
Flenniken, Ann M.
Teboul, Lydia
Codner, Gemma
Wells, Sara
Herault, Yann
Sorg, Tania
Vasseurm, Laurent
Selloum, Mohammed
Roux, Michel
Jacobs, Hugues
Meziane, Hamid
Champy, Marie-France
About, Ghina Bou
Murray, Steve
Chesler, Elissa
Kumar, Vivek
White, Jacqui
Braun, Robert E.
Beaudet, Arthur L.
Dickinson, Mary E.
Heaney, Jason D.
Lorenzo, Isabel
Lanza, Denise G.
Reynolds, Corey L.
Ward, Christopher S.
Samaco, Rodney C.
Veeraragavan, Surabi
Hsu, Chih-Wei
Christianson, Audrey E.
Gallegos, Juan J.
Seavitt, John Richard
Gaspero, Angelina
Green, Jennie R.
Garza
Garza, Arturo
Bohat, Ritu
Sedlacek, Radislav
机构
[1] Queen Mary Univ London, Sch Med & Dent, William Harvey Res Inst, London, England
[2] Oregon State Univ, Linus Pauling Inst, Corvallis, OR 97331 USA
[3] Oregon State Univ, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
基金
美国国家卫生研究院;
关键词
INFORMATICS PLATFORM; PLEIOTROPY; DISCOVERY;
D O I
10.1007/s00335-019-09804-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine.
引用
收藏
页码:143 / 150
页数:8
相关论文
共 50 条
  • [41] Animal Models of Human Prostate Cancer: The Consensus Report of the New York Meeting of the Mouse Models of Human Cancers Consortium Prostate Pathology Committee
    Ittmann, Michael
    Huang, Jiaoti
    Radaelli, Enrico
    Martin, Philip
    Signoretti, Sabina
    Sullivan, Ruth
    Simons, Brian W.
    Ward, Jerrold M.
    Robinson, Brian D.
    Chu, Gerald C.
    Loda, Massimo
    Thomas, George
    Borowsky, Alexander
    Cardiff, Robert D.
    CANCER RESEARCH, 2013, 73 (09) : 2718 - 2736
  • [42] Mouse models for human epithelial disease: novel insights and new horizons
    Fong, Peying
    EXPERIMENTAL PHYSIOLOGY, 2009, 94 (02) : 169 - 170
  • [43] iMITS: supporting high-throughput strain production by CRISPR-based methods for the international mouse phenotyping consortium
    Matthews, Peter
    Meehan, Terrence
    TRANSGENIC RESEARCH, 2016, 25 (02) : 250 - 250
  • [44] Using the human-mouse: disease connection to identify mouse models of human disease
    Anagnostopoulos, Anna
    Bello, Susan M.
    Smith, Cynthia L.
    Dene, Howard
    Tomczuk, Monika
    Richards-Smith, Beverly
    Onda, Hiroaki
    Knowlton, Michelle
    Law, MeiYee
    Eppig, Janan T.
    TRANSGENIC RESEARCH, 2016, 25 (02) : 205 - 205
  • [45] New mouse models for human cancer
    Berns, A
    BRITISH JOURNAL OF CANCER, 2000, 83 : 5 - 5
  • [46] Predicting human disease mutations and identifying drug targets from mouse gene knockout phenotyping campaigns
    Brommage, Robert
    Powell, David R.
    Vogel, Peter
    DISEASE MODELS & MECHANISMS, 2019, 12 (05)
  • [47] New mouse genomics consortium
    Dooley, EE
    ENVIRONMENTAL HEALTH PERSPECTIVES, 2001, 109 (09) : A421 - A421
  • [48] The NCI-Mouse models of human cancers consortium and experimental therapeutics.
    Marks, CL
    CLINICAL CANCER RESEARCH, 2005, 11 (24) : 9097S - 9097S
  • [49] An international repository for mouse models of human hair diseases
    Sundberg, J. P.
    Rockwood, S. F.
    Pratt, H.
    Lutz, C.
    JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2013, 133 (05) : 1413 - 1413
  • [50] From Mouse Models to Human Disease: An Approach for Amyotrophic Lateral Sclerosis
    Alrafiah, Aziza Rashed
    IN VIVO, 2018, 32 (05): : 983 - 998