New models for human disease from the International Mouse Phenotyping Consortium

被引:48
|
作者
Cacheiro, Pilar [1 ]
Haendel, Melissa A. [2 ,3 ]
Smedley, Damian [1 ]
Meehan, Terrence
Mason, Jeremy
Mashhadi, Hamed Haseli
Munoz-Fuentes, Violeta
Tocchini, Glauco
Lloyd, Kent K. C.
McKerlie, Colin
Bower, Lynette
Clary, Dave
Nutter, Lauryl M. J.
Flenniken, Ann M.
Teboul, Lydia
Codner, Gemma
Wells, Sara
Herault, Yann
Sorg, Tania
Vasseurm, Laurent
Selloum, Mohammed
Roux, Michel
Jacobs, Hugues
Meziane, Hamid
Champy, Marie-France
About, Ghina Bou
Murray, Steve
Chesler, Elissa
Kumar, Vivek
White, Jacqui
Braun, Robert E.
Beaudet, Arthur L.
Dickinson, Mary E.
Heaney, Jason D.
Lorenzo, Isabel
Lanza, Denise G.
Reynolds, Corey L.
Ward, Christopher S.
Samaco, Rodney C.
Veeraragavan, Surabi
Hsu, Chih-Wei
Christianson, Audrey E.
Gallegos, Juan J.
Seavitt, John Richard
Gaspero, Angelina
Green, Jennie R.
Garza
Garza, Arturo
Bohat, Ritu
Sedlacek, Radislav
机构
[1] Queen Mary Univ London, Sch Med & Dent, William Harvey Res Inst, London, England
[2] Oregon State Univ, Linus Pauling Inst, Corvallis, OR 97331 USA
[3] Oregon State Univ, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
基金
美国国家卫生研究院;
关键词
INFORMATICS PLATFORM; PLEIOTROPY; DISCOVERY;
D O I
10.1007/s00335-019-09804-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine.
引用
收藏
页码:143 / 150
页数:8
相关论文
共 50 条
  • [31] Cohesin and human disease: lessons from mouse models
    Singh, Vijay Pratap
    Gerton, Jennifer L.
    CURRENT OPINION IN CELL BIOLOGY, 2015, 37 : 9 - 17
  • [32] ENU mutagenesis for new mouse models of human bone disease
    Aubin, Jane E.
    BONE, 2010, 47 : S382 - S382
  • [33] Identification of Novel Genes Required for Eye Function via Systematic Screening of Knockout Mouse Lines by the International Mouse Phenotyping Consortium
    Moshiri, Ala
    Moore, Bret
    Cooper, Ann
    Leonard, Brian
    Edwards, Sydney
    Sebbag, Lionel
    Mai, Denise
    Griffey, Stephen M.
    Clary, David
    Bower, Lynette R.
    Thomasy, Sara M.
    Meehan, Terrence
    Roux, Michel J.
    Reilly, Patrick
    Herault, Yann
    Murphy, Christopher
    INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2017, 58 (08)
  • [34] Mouse models for human disease
    Hardouin, SN
    Nagy, A
    CLINICAL GENETICS, 2000, 57 (04) : 237 - 244
  • [35] Mouse models of Rett syndrome: from behavioural phenotyping to preclinical evaluation of new therapeutic approaches
    Ricceri, Laura
    De Filippis, Bianca
    Laviola, Giovanni
    BEHAVIOURAL PHARMACOLOGY, 2008, 19 (5-6): : 501 - 517
  • [36] Classification of proliferative pulmonary lesions of the mouse: Recommendations of the mouse models of human cancers consortium
    Nikitin, AY
    Alcaraz, A
    Anver, MR
    Bonson, RT
    Cardiff, RD
    Dixon, D
    Fraire, AE
    Gabrielson, EW
    Gunning, WT
    Haines, DC
    Kaufman, MH
    Linnoila, RI
    Maronpot, RR
    Rabson, AS
    Reddick, RL
    Rehm, S
    Rozengurt, N
    Schuller, HM
    Shmidt, EN
    Travis, WD
    Ward, JM
    Jacks, T
    CANCER RESEARCH, 2004, 64 (07) : 2307 - 2316
  • [37] Comprehensive Phenotyping of Mouse Autism Models
    Abel, Ted
    NEUROPSYCHOPHARMACOLOGY, 2013, 38 : S4 - S5
  • [38] Innovations in phenotyping of mouse models in the German Mouse Clinic
    Fuchs, Helmut
    Gailus-Durner, Valerie
    Neschen, Susanne
    Adler, Thure
    Afonso, Luciana Caminha
    Aguilar-Pimentel, Juan Antonio
    Becker, Lore
    Bohla, Alexander
    Calzada-Wack, Julia
    Cohrs, Christian
    Dewert, Anna
    Fridrich, Barbara
    Garrett, Lillian
    Glasl, Lisa
    Goetz, Alexander
    Hans, Wolfgang
    Hoelter, Sabine M.
    Horsch, Marion
    Hurt, Anja
    Janas, Eva
    Janik, Dirk
    Kahle, Melanie
    Kistler, Martin
    Klein-Rodewald, Tanja
    Lengger, Christoph
    Ludwig, Tonia
    Maier, Holger
    Marschall, Susan
    Micklich, Kateryna
    Moeller, Gabriele
    Naton, Beatrix
    Prehn, Cornelia
    Puk, Oliver
    Racz, Ildiko
    Raess, Michael
    Rathkolb, Birgit
    Rozman, Jan
    Scheerer, Markus
    Schiller, Evelyn
    Schrewe, Anja
    Steinkamp, Ralph
    Stoeger, Claudia
    Sun, Minxuan
    Szymczak, Wilfried
    Treise, Irina
    Panesso, Ingrid Liliana Vargas
    Vernaleken, Alexandra M.
    Willershaeuser, Monja
    Wolff-Muscate, Annemarie
    Zeh, Ramona
    MAMMALIAN GENOME, 2012, 23 (9-10) : 611 - 622
  • [39] Innovations in phenotyping of mouse models in the German Mouse Clinic
    Helmut Fuchs
    Valérie Gailus-Durner
    Susanne Neschen
    Thure Adler
    Luciana Caminha Afonso
    Juan Antonio Aguilar-Pimentel
    Lore Becker
    Alexander Bohla
    Julia Calzada-Wack
    Christian Cohrs
    Anna Dewert
    Barbara Fridrich
    Lillian Garrett
    Lisa Glasl
    Alexander Götz
    Wolfgang Hans
    Sabine M. Hölter
    Marion Horsch
    Anja Hurt
    Eva Janas
    Dirk Janik
    Melanie Kahle
    Martin Kistler
    Tanja Klein-Rodewald
    Christoph Lengger
    Tonia Ludwig
    Holger Maier
    Susan Marschall
    Kateryna Micklich
    Gabriele Möller
    Beatrix Naton
    Cornelia Prehn
    Oliver Puk
    Ildikó Rácz
    Michael Räß
    Birgit Rathkolb
    Jan Rozman
    Markus Scheerer
    Evelyn Schiller
    Anja Schrewe
    Ralph Steinkamp
    Claudia Stöger
    Minxuan Sun
    Wilfried Szymczak
    Irina Treise
    Ingrid Liliana Vargas Panesso
    Alexandra M. Vernaleken
    Monja Willershäuser
    Annemarie Wolff-Muscate
    Ramona Zeh
    Mammalian Genome, 2012, 23 : 611 - 622
  • [40] NCl mouse models of human cancers consortium - Resources for discovery.
    Marks, CL
    AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 73 (05) : 251 - 251