Calibrating Functional Parameters in the Ion Channel Models of Cardiac Cells

被引:43
|
作者
Plumlee, Matthew [1 ]
Joseph, V. Roshan [1 ]
Yang, Hui [1 ]
机构
[1] Univ Michigan, Dept Ind & Operat Engn, Ann Arbor, MI 48109 USA
基金
美国国家科学基金会;
关键词
Calibration; Computer experiment; Functional response; High-dimensional parameters; Simulation experiment; COMPUTER-MODEL; MODULATION; EQUATIONS; DESIGN;
D O I
10.1080/01621459.2015.1119695
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
Computational modeling is a popular tool to understand a diverse set of complex systems. The output from a computational model depends on a set of parameters that are unknown to the designer, but a modeler can estimate them by collecting physical data. In the described study of the ion channels of ventricular myocytes, the parameter of interest is a function as opposed to a scalar or a set of scalars. This article develops a new modeling strategy to nonparametrically study the functional parameter using Bayesian inference with Gaussian process prior distributions. A new sampling scheme is devised to address this unique problem.
引用
收藏
页码:500 / 509
页数:10
相关论文
共 50 条
  • [31] A methodology for calibrating parameters in discrete element models based on machine learning surrogates
    Joaquín Irazábal
    Fernando Salazar
    David J. Vicente
    Computational Particle Mechanics, 2023, 10 : 1031 - 1047
  • [32] Cardiac Ion Channel Diseases ("Channelopathies"): An Update
    Dittmann, S.
    Stallmeyer, B.
    Mueller, J.
    Seebohm, G.
    Schulze-Bahr, E.
    AKTUELLE KARDIOLOGIE, 2016, 5 (04) : 282 - 288
  • [33] MicroRNA directly modulates cardiac ion channel
    Ciarán Martin Fitzpatrick
    Nature Reviews Cardiology, 2021, 18 : 308 - 308
  • [34] Ion Channel Disorders and Sudden Cardiac Death
    Garcia-Elias, Anna
    Benito, Begona
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 19 (03)
  • [35] Ion channel expression patterns in glioblastoma stem cells with functional and therapeutic implications for malignancy
    Pollak, Julia
    Rai, Karan G.
    Funk, Cory C.
    Arora, Sonali
    Lee, Eunjee
    Zhu, Jun
    Price, Nathan D.
    Paddison, Patrick J.
    Ramirez, Jan-Marino
    Rostomily, Robert C.
    PLOS ONE, 2017, 12 (03):
  • [36] Complexity of cardiac ion channel macromolecular complexes
    Mohler, Peter J.
    Abriel, Hugues
    CARDIOVASCULAR RESEARCH, 2016, 110 (02) : 163 - 164
  • [37] Remodeling of Ion Channel Trafficking and Cardiac Arrhythmias
    Blandin, Camille E.
    Gravez, Basile J.
    Hatem, Stephane N.
    Balse, Elise
    CELLS, 2021, 10 (09)
  • [38] Ion Channel Toolbox for Cardiac Safety Evaluation
    Martin, Ruth L.
    Limberis, James T.
    Liu, Xiaoqin
    Houseman, Kathryn A.
    Su, Zhi
    Gintant, Gary A.
    Cox, Bryan F.
    BIOPHYSICAL JOURNAL, 2009, 96 (03) : 262A - 263A
  • [39] Cytoskeletal roles in cardiac ion channel expression
    Steele, David F.
    Fedida, David
    BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2014, 1838 (02): : 665 - 673
  • [40] MicroRNA directly modulates cardiac ion channel
    Fitzpatrick, Ciaran Martin
    NATURE REVIEWS CARDIOLOGY, 2021, 18 (05) : 308 - 308