THEORETICAL PREDICTION OF SECONDARY STRUCTURES OF PROTEINS USING RECOGNITION FACTORS

被引:0
|
作者
THORNTON, S
FABIAN, ES
FRAGA, S
PARKER, JMR
HODGES, RS
机构
[1] UNIV ALBERTA,DEPT CHEM,EDMONTON T6G 2G2,ALBERTA,CANADA
[2] UNIV ALBERTA,DEPT BIOCHEM,EDMONTON T6G 2H7,ALBERTA,CANADA
来源
关键词
D O I
暂无
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A knowledge of the secondary structure of a protein will aid in improving the theoretical prediction of its tertiary structure, at a considerably reduced cost in terms of computing time. It is shown in this work that the fragments of a protein may be predicted from the information contained in the recognition and flexibility profiles, constructed from the corresponding factors. The accuracy of the predictions for 88 proteins highlights the significance of the recognition factors of theoretical origin developed at this laboratory.
引用
收藏
页码:87 / 97
页数:11
相关论文
共 50 条
  • [21] The Mathematics of Secondary Structures in Proteins
    Toda, Magdalena D.
    Athukorallage, Bhagya
    BIOPHYSICAL JOURNAL, 2020, 118 (03) : 43A - 43A
  • [22] THEORETICAL PREDICTION OF SEQUENCE-DEPENDENT DNA SUPERSTRUCTURES AND THEIR IMPLICATIONS IN RECOGNITION MECHANISMS WITH PROTEINS
    BOFFELLI, D
    DESANTIS, P
    PALLESCHI, A
    SCIPIONI, A
    SAVINO, M
    INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 1992, 42 (05) : 1409 - 1426
  • [23] Protein Secondary Structures Prediction Using Data Fusion Approach
    Chu, Yen-Wei
    Yu, Chin-Sheng
    Ng, Hui-Fuang
    2008 7TH WORLD CONGRESS ON INTELLIGENT CONTROL AND AUTOMATION, VOLS 1-23, 2008, : 1885 - +
  • [24] PREDICTION OF PROTEIN SECONDARY STRUCTURES USING A COMBINED METHOD BASED ON THE RECOGNITION, LIM AND GARNIER-OSGUTHORPE-ROBSON ALGORITHMS
    THORNTON, S
    SANFABIAN, E
    FRAGA, S
    PARKER, JMR
    HODGES, RS
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 1991, 78 : 321 - 336
  • [25] RNA SECONDARY STRUCTURES AND THEIR PREDICTION
    ZUKER, M
    SANKOFF, D
    BULLETIN OF MATHEMATICAL BIOLOGY, 1984, 46 (04) : 591 - 621
  • [26] AN ANALYSIS OF THE PREDICTION OF SECONDARY STRUCTURES
    BUSETTA, B
    HOSPITAL, M
    BIOCHIMICA ET BIOPHYSICA ACTA, 1982, 701 (01) : 111 - 118
  • [27] Theoretical Analysis of Secondary Structures of β-Peptides
    Wu, Yun-Dong
    Han, Wei
    Wang, De-Ping
    Gao, Yi
    Zhao, Yi-Lei
    ACCOUNTS OF CHEMICAL RESEARCH, 2008, 41 (10) : 1418 - 1427
  • [28] A novel fold recognition method using composite predicted secondary structures
    An, YL
    Friesner, RA
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2002, 48 (02) : 352 - 366
  • [29] DETERMINATION OF SECONDARY STRUCTURES OF PROTEINS USING VIBRATIONAL CIRCULAR-DICHROISM
    KEIDERLING, TA
    PANCOSKA, P
    BAUMRUK, V
    URBANOVA, M
    GUPTA, VP
    DUKOR, RK
    HUO, DF
    MOLECULAR MODELING: FROM VIRTUAL TOOLS TO REAL PROBLEMS, 1994, 576 : 61 - 70
  • [30] Prediction of Secondary Structure of Proteins Using Sliding Window and Backpropagation Algorithm
    Agarwal, Shivani
    Singh, Vijander
    Agarwal, Pankaj
    Rani, Asha
    APPLICATIONS OF ARTIFICIAL INTELLIGENCE TECHNIQUES IN ENGINEERING, SIGMA 2018, VOL 1, 2019, 698 : 533 - 541