Wochenende — modular and flexible alignment-based shotgun metagenome analysis

被引:0
|
作者
Ilona Rosenboom
Tobias Scheithauer
Fabian C. Friedrich
Sophia Pörtner
Lisa Hollstein
Marie-Madlen Pust
Konstantinos Sifakis
Tom Wehrbein
Bodo Rosenhahn
Lutz Wiehlmann
Patrick Chhatwal
Burkhard Tümmler
Colin F. Davenport
机构
[1] Hannover Medical School,Clinical Research Group Molecular Pathology of Cystic Fibrosis and Pseudomonas Genomics, Clinic for Pediatric Pneumology, Allergology and Neonatology
[2] Hannover Medical School,Research Core Unit Genomics
[3] University of Crete,Department of Microbiology
[4] Institut Fuer Informationsverarbeitung (TNT),undefined
[5] Leibniz University Hannover,undefined
[6] Hannover Medical School,undefined
来源
BMC Genomics | / 23卷
关键词
Metagenomics; Genomics; Absolute quantification; Metagenomic visualization; Long-read metagenomics;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] A Bayesian Approach to Alignment-Based Image Hallucination
    Tappen, Marshall F.
    Liu, Ce
    COMPUTER VISION - ECCV 2012, PT VII, 2012, 7578 : 236 - 249
  • [22] Alignment-based Similarity Measurement for Action Traces
    Gao, Juntao
    Zhao, Danchun
    Zhou, Hongbo
    Wang, Yongan
    INTERNATIONAL JOURNAL OF COMPUTER SCIENCE AND NETWORK SECURITY, 2014, 14 (08): : 30 - 35
  • [23] ANCA: Alignment-Based Network Construction Algorithm
    Chow, Kevin
    Sarkar, Aisharjya
    Elhesha, Rasha
    Cinaglia, Pietro
    Ay, Ahmet
    Kahveci, Tamer
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 18 (02) : 512 - 524
  • [24] GenomeWarp: an alignment-based variant coordinate transformation
    McLean, Cory Y.
    Hwang, Yeongwoo
    Poplin, Ryan
    DePristo, Mark A.
    BIOINFORMATICS, 2019, 35 (21) : 4389 - 4391
  • [25] Insights into the physiology of Methylotenera mobilis as revealed by metagenome-based shotgun proteomic analysis
    Bosch, Gundula
    Wang, Tiansong
    Latypova, Ekaterina
    Kalyuzhnaya, Marina G.
    Hackett, Murray
    Chistoserdova, Ludmila
    MICROBIOLOGY-SGM, 2009, 155 : 1103 - 1110
  • [26] Coordination analysis using global structural constraints and alignment-based local features
    Hara K.
    Shimbo M.
    Matsumoto Y.
    Transactions of the Japanese Society for Artificial Intelligence, 2010, 25 (05) : 560 - 569
  • [27] Sequence Compression and Alignment-Based Process Alarm Prediction
    Bantay, Laszlo
    Sas, Norbert
    Doergo, Gyula
    Abonyi, Janos
    INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH, 2023, 62 (27) : 10577 - 10586
  • [28] An alignment-based surface pattern for a question answering system
    Sung, Cheng-Lung
    Lee, Cheng-Wei
    Yen, Hsu-Chun
    Hsu, Wen-Lian
    PROCEEDINGS OF THE 2008 IEEE INTERNATIONAL CONFERENCE ON INFORMATION REUSE AND INTEGRATION, 2008, : 172 - +
  • [29] Alignment-Based Partitioning of Large-Scale Ontologies
    Hamdi, Faycal
    Safar, Brigitte
    Reynaud, Chantal
    Zargayouna, Haifa
    ADVANCES IN KNOWLEDGE DISCOVERY AND MANAGEMENT, 2010, 292 : 251 - +
  • [30] ALIGNMENT-BASED CONFORMANCE CHECKING OF HIERARCHICAL PROCESS MODELS
    Wang, Lu
    Han, Xiao
    Qi, Man
    Wang, Kang
    Li, Peng
    COMPUTING AND INFORMATICS, 2024, 43 (02) : 149 - 180