Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines

被引:5
|
作者
Mark Velasco, John [1 ,3 ]
Chinnawirotpisan, Piyawan [1 ]
Valderama, Maria Theresa [1 ]
Joonlasak, Khajohn [1 ]
Manasatienkij, Wudtichai [1 ]
Huang, Angkana [1 ]
Diones, Paula Corazon [1 ]
Claire Navarro, Fatima [1 ]
Vila, Vicente, II [2 ]
Tabinas Jr, Henry [2 ]
Chua Jr, Domingo [2 ]
Fernandez, Stefan [1 ]
Jones, Anthony [1 ]
Klungthong, Chonticha [1 ]
机构
[1] Armed Forces Res Inst Med Sci, US Army Med Directorate, Bangkok, Thailand
[2] Armed Forces Philippines Hlth Serv Command, V Luna Med Ctr, Quezon City, Philippines
[3] Univ Philippines Manila, Manila, Philippines
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2021年 / 10卷 / 28期
关键词
D O I
10.1128/MRA.00498-21
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Here, we report the complete genome sequences of 11 severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants from the Philippines. Lineage analysis showed 3 B.1.1.7 and 8 B.1.351 sequences. One B.1.1.7 sequence contained two additional mutations, F318N and V320F, with V320F located in the receptor binding domain of the S1 subunit.
引用
收藏
页数:10
相关论文
共 50 条
  • [21] Comparison of SARS-CoV-2 Variants of Concern Alpha (B.1.1.7) vs. Beta (B.1.351) in Critically Ill Patients: A Multicenter Cohort Study
    Louis, Guillaume
    Belveyre, Thibaut
    Goetz, Christophe
    Gibot, Sebastien
    Dunand, Paul
    Conrad, Marie
    Gaci, Rostane
    Gette, Sebastien
    Ouamara, Nadia
    Perez, Pascale
    Cadoz, Cyril
    Picard, Yoann
    Mellati, Nouchan
    FRONTIERS IN MEDICINE, 2022, 9
  • [22] Structure-Function Analyses of New SARS-CoV-2 Variants B.1.1.7, B.1.351 and B.1.1.28.1: Clinical, Diagnostic, Therapeutic and Public Health Implications
    Singh, Jasdeep B.
    Samal, Jasmine
    Kumar, Vipul
    Sharma, Jyoti
    Agrawal, Usha
    Ehtesham, Nasreen Z.
    Sundar, Durai
    Rahman, Syed Asad
    Hira, Subhash
    Hasnain, Seyed E.
    VIRUSES-BASEL, 2021, 13 (03):
  • [23] Prior infection with SARS-CoV-2 WA1/2020 partially protects rhesus macaques against reinfection with B.1.1.7 and B.1.351 variants
    Chandrashekar, Abishek
    Liu, Jinyan
    Yu, Jingyou
    McMahan, Katherine
    Tostanoski, Lisa H.
    Jacob-Dolan, Catherine
    Mercado, Noe B.
    Anioke, Tochi
    Chang, Aiquan
    Gardner, Sarah
    Giffin, Victoria M.
    Hope, David L.
    Nampanya, Felix
    Patel, Shivani
    Sanborn, Owen
    Sellers, Daniel
    Wan, Huahua
    Martinot, Amanda J.
    Baczenas, John J.
    O'Connor, Shelby L.
    Pessaint, Laurent
    Valentin, Daniel
    Espina, Benjamin
    Wattay, Lauren
    Ferrari, Maria G.
    Brown, Renita
    Cook, Anthony
    Bueno-Wilkerson, Deandre
    Teow, Elyse
    Andersen, Hanne
    Lewis, Mark G.
    Barouch, Dan H.
    SCIENCE TRANSLATIONAL MEDICINE, 2021, 13 (618)
  • [24] Multiple partition Markov model for B.1.1.7, B.1.351, B.1.617.2, and P.1 variants of SARS-CoV 2 virus
    Garcia, Jesus Enrique
    Gonzalez-Lopez, Veronica Andrea
    Tasca, Gustavo Henrique
    COMPUTATIONAL STATISTICS, 2022,
  • [25] SARS-CoV-2 B.1.1.7 (alpha) and B.1.351 (beta) variants induce pathogenic patterns in K18-hACE2 transgenic mice distinct from early strains
    Peter Radvak
    Hyung-Joon Kwon
    Martina Kosikova
    Uriel Ortega-Rodriguez
    Ruoxuan Xiang
    Je-Nie Phue
    Rong-Fong Shen
    James Rozzelle
    Neeraj Kapoor
    Taylor Rabara
    Jeff Fairman
    Hang Xie
    Nature Communications, 12
  • [26] SARS-CoV-2 B.1.1.7 (alpha) and B.1.351 (beta) variants induce pathogenic patterns in K18-hACE2 transgenic mice distinct from early strains
    Radvak, Peter
    Kwon, Hyung-Joon
    Kosikova, Martina
    Ortega-Rodriguez, Uriel
    Xiang, Ruoxuan
    Phue, Je-Nie
    Shen, Rong-Fong
    Rozzelle, James
    Kapoor, Neeraj
    Rabara, Taylor
    Fairman, Jeff
    Xie, Hang
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [27] Serum Neutralizing Activity against B.1.1.7, B.1.351, and P.1 SARS-CoV-2 Variants of Concern in Hospitalized COVID-19 Patients
    Trombetta, Claudia Maria
    Marchi, Serena
    Viviani, Simonetta
    Manenti, Alessandro
    Benincasa, Linda
    Ruello, Antonella
    Bombardieri, Emilio
    Vicenti, Ilaria
    Zazzi, Maurizio
    Montomoli, Emanuele
    VIRUSES-BASEL, 2021, 13 (07):
  • [28] Coding-Complete Genome Sequences of Two SARS-CoV-2 Isolates from Egypt
    Kandeil, Ahmed
    Mostafa, Ahmed
    El-Shesheny, Rabeh
    Shehata, Mahmoud
    Roshdy, Wael H.
    Ahmed, Shymaa Showky
    Gomaa, Mokhtar
    El Taweel, Ahmed
    Kayed, Ahmed E.
    Mahmoud, Sara H.
    Moatasim, Yassmin
    Kutkat, Omnia
    Kamel, Mina Nabil
    Mahrous, Noura
    El Sayes, Mohamed
    El Guindy, Nancy M.
    Naguib, Amal
    Ali, Mohamed A.
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2020, 9 (22):
  • [29] Coding-Complete Genome Sequences of Three SARS-CoV-2 Strains from Bangladesh
    Akter, Shahina
    Banu, Tanjina Akhtar
    Goswami, Barna
    Osman, Eshrar
    Uzzaman, Mohammad Samir
    Habib, M. Ahashan
    Jahan, Iffat
    Mahmud, Abu Sayeed Mohammad
    Sarker, M. Murshed Hasan
    Hossain, M. Saddam
    Shamsuzzaman, A. K. Mohammad
    Nafisa, Tasnim
    Molla, M. Maruf Ahmed
    Yeasmin, Mahmuda
    Ghosh, Asish Kumar
    Al Din, Sheikh M. Selim
    Ray, Utpal Chandra
    Sajib, Salek Ahmed
    Hossain, Maqsud
    Khan, M. Salim
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2020, 9 (39):
  • [30] In Vitro Rapid Antigen Test Performance with the SARS-CoV-2 Variants of Concern B.1.1.7 (Alpha), B.1.351 (Beta), P.1 (Gamma), and B.1.617.2 (Delta)
    Jungnick, Sabrina
    Hobmaier, Bernhard
    Mautner, Lena
    Hoyos, Mona
    Haase, Maren
    Baiker, Armin
    Lahne, Heidi
    Eberle, Ute
    Wimmer, Clara
    Hepner, Sabrina
    Sprenger, Annika
    Berger, Carola
    Dangel, Alexandra
    Ippisch, Siegfried
    Hahner, Sonja
    Wildner, Manfred
    Liebl, Bernhard
    Ackermann, Nikolaus
    Sing, Andreas
    Fingerle, Volker
    MICROORGANISMS, 2021, 9 (09)