Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines

被引：5
|
作者：
Mark Velasco, John [1 ,3 ]
Chinnawirotpisan, Piyawan [1 ]
Valderama, Maria Theresa [1 ]
Joonlasak, Khajohn [1 ]
Manasatienkij, Wudtichai [1 ]
Huang, Angkana [1 ]
Diones, Paula Corazon [1 ]
Claire Navarro, Fatima [1 ]
Vila, Vicente, II [2 ]
Tabinas Jr, Henry [2 ]
Chua Jr, Domingo [2 ]
Fernandez, Stefan [1 ]
Jones, Anthony [1 ]
Klungthong, Chonticha [1 ]
机构：
[1] Armed Forces Res Inst Med Sci, US Army Med Directorate, Bangkok, Thailand
[2] Armed Forces Philippines Hlth Serv Command, V Luna Med Ctr, Quezon City, Philippines
[3] Univ Philippines Manila, Manila, Philippines
来源：
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2021年 / 10卷 / 28期
关键词：
D O I：
10.1128/MRA.00498-21
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
Here, we report the complete genome sequences of 11 severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants from the Philippines. Lineage analysis showed 3 B.1.1.7 and 8 B.1.351 sequences. One B.1.1.7 sequence contained two additional mutations, F318N and V320F, with V320F located in the receptor binding domain of the S1 subunit.
引用
收藏
页数：10
相关论文
共 50 条
  • [11] Replication Kinetics of B.1.351 and B.1.1.7 SARS-CoV-2 Variants of Concern Including Assessment of a B.1.1.7 Mutant Carrying a Defective ORF7a Gene
    Pyke, Alyssa T.
    Nair, Neelima
    van den Hurk, Andrew F.
    Burtonclay, Peter
    Nguyen, Son
    Barcelon, Jean
    Kistler, Carol
    Schlebusch, Sanmarie
    McMahon, Jamie
    Moore, Frederick
    VIRUSES-BASEL, 2021, 13 (06):
  • [12] Impact of animal saliva on the performance of rapid antigen tests for detection of SARS-CoV-2 (wildtype and variants B.1.1.7 and B.1.351)
    Hagag, Ibrahim T.
    Weber, Saskia
    Sadeghi, Balal
    Groschup, Martin H.
    Keller, Markus
    VETERINARY MICROBIOLOGY, 2021, 262
  • [13] Detection and Genome Sequencing of SARS-CoV-2 Variants Belonging to the B.1.1.7 Lineage in the Philippines
    Tablizo, Francis A.
    Saloma, Cynthia P.
    Castro, Marc Jerrone R.
    Kim, Kenneth M.
    Yangzon, Maria Sofia L.
    Lapid, Carlo M.
    Maralit, Benedict A.
    Ayes, Marc Edsel C.
    Yap, Jan Michael C.
    Llames, Jo-Hannah S.
    Araiza, Shiela Mae M.
    Punayan, Kris P.
    Asin, Irish Coleen A.
    Tambaoan, Candice Francheska B.
    Chong, Asia Louisa U.
    Padilla, Karol Sophia Agape R.
    Cruz, Rianna Patricia S.
    Morado, El King D.
    Dizon, Joshua Gregor A.
    Cutiongco-de la Paz, Eva Maria
    de Guzman, Alethea R.
    Hao, Razel Nikka M.
    Zamora, Arianne A.
    Pacial, Devon Ray
    Magalang, Juan Antonio R.
    Alejandria, Marissa
    Carlos, Celia
    Ong-Lim, Anna
    Salvana, Edsel Maurice
    Wong, John Q.
    Montoya, Jaime C.
    Singh-Vergeire, Maria Rosario
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2021, 10 (18):
  • [14] Live attenuated virus vaccine protects against SARS-CoV-2 variants of concern B.1.1.7 (Alpha) and B.1.351 (Beta)
    Trimpert, Jakob
    Adler, Julia M.
    Eschke, Kathrin
    Abdelgawad, Azza
    Firsching, Theresa C.
    Ebert, Nadine
    Tran Thi Nhu Thao
    Gruber, Achim D.
    Thiel, Volker
    Osterrieder, Nikolaus
    Kunec, Dusan
    SCIENCE ADVANCES, 2021, 7 (49)
  • [15] Coding-Complete Genome Sequences of 23 SARS-CoV-2 Samples from the Philippines
    Velasco, John Mark
    Chinnawirotpisan, Piyawan
    Joonlasak, Khajohn
    Manasatienkij, Wudtichai
    Huang, Angkana
    Valderama, Maria Theresa
    Diones, Paula Corazon
    Leonardia, Susie
    Timbol, Maria Leanor
    Navarro, Fatima Claire
    Villa, Vicente
    Tabinas, Henry, Jr.
    Chua, Domingo, Jr.
    Fernandez, Stefan
    Jones, Anthony
    Klungthong, Chonticha
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2020, 9 (43):
  • [16] Detection of the new SARS-CoV-2 variants of concern B.1.1.7 and B.1.351 in five SARS-CoV-2 rapid antigen tests (RATs), Germany, March 2021
    Jungnick, Sabrina
    Hobmaier, Bernhard
    Mautner, Lena
    Hoyos, Mona
    Haase, Maren
    Baiker, Armin
    Lahne, Heidi
    Eberle, Ute
    Wimmer, Clara
    Hepner, Sabrina
    Sprenger, Annika
    Berger, Carola
    Dangel, Alexandra
    Wildner, Manfred
    Liebl, Bernhard
    Ackermann, Nikolaus
    Sing, Andreas
    Fingerle, Volker
    EUROSURVEILLANCE, 2021, 26 (16)
  • [17] Direct RT-qPCR assay for SARS-CoV-2 variants of concern (Alpha, B.1.1.7 and Beta, B.1.351) detection and quantification in wastewater
    Yaniv, Karin
    Ozer, Eden
    Shagan, Marilou
    Lakkakula, Satish
    Plotkin, Noam
    Bhandarkar, Nikhil Suresh
    Kushmaro, Ariel
    ENVIRONMENTAL RESEARCH, 2021, 201
  • [18] Neutralization of SARS-CoV-2 Variants B.1.429 and B.1.351
    Shen, Xiaoying
    Tang, Haili
    Pajon, Rolando
    Smith, Gale
    Glenn, Gregory M.
    Shi, Wei
    Korber, Bette
    Montefiori, David C.
    NEW ENGLAND JOURNAL OF MEDICINE, 2021, 384 (24): : 2352 - 2354
  • [19] The Natural Stilbenoid (-)-Hopeaphenol Inhibits Cellular Entry of SARS-CoV-2 USA-WA1/2020, B.1.1.7, and B.1.351 Variants
    Tietjen, Ian
    Cassel, Joel
    Register, Emery T.
    Zhou, Xiang Yang
    Messick, Troy E.
    Keeney, Frederick
    Lu, Lily D.
    Beattie, Karren D.
    Rali, Topul
    Tebas, Pablo
    Ertl, Hildegund C. J.
    Salvino, Joseph M.
    Davis, Rohan A.
    Montaner, Luis J.
    ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2021, 65 (12)
  • [20] The SARS-CoV-2 B.1.351 lineage (VOC β) is outgrowing the B.1.1.7 lineage (VOC α) in some French regions in April 2021
    Roquebert, Benedicte
    Trombert-Paolantoni, Sabine
    Haim-Boukobza, Stephanie
    Lecorche, Emmanuel
    Verdurme, Laura
    Fouliongne, Vincent
    Sofonea, Mircea T.
    Alizon, Samuel
    EUROSURVEILLANCE, 2021, 26 (23)
12345