Solid phase subtractive cloning in differentially expressed genes identification

被引:1
|
作者
D'Urso, Oscar F. [1 ]
D'Urso, Pietro I. [2 ]
Storelli, Carlo [3 ]
Marsigliante, Santo [3 ]
机构
[1] Nonprofit Res Assoc, Promeridio Assoc, I-72018 San Michele Salentino, BR, Italy
[2] Univ Bari, Neurosurg Sect, Dept Neurosci, Sch Med, I-70124 Bari, Italy
[3] Univ Lecce, Dept Biol & Environm Sci & Technol DiSTeBA, I-73100 Lecce, Italy
关键词
Subtractive cloning; Microarray; Solid surface; Library; Sequencing; Differentially expressed; CDNA; HYBRIDIZATION; CELLS;
D O I
10.1007/s11033-009-9530-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We developed an array-based subtractive hybridization system for one-step high-throughput subtraction. We printed subtractor RNA up to 10.000 times obtaining an excellent contact surface using a little amount of RNA. During hybridization cDNA, common to subtractor and target samples, remains attached to slide immobilized RNA, leaving free in solution target specific cDNA which after retrieval is cloned.
引用
收藏
页码:1435 / 1438
页数:4
相关论文
共 50 条
  • [41] Identification of differentially expressed genes in a porcine in vivo model of adipogenesis using suppression subtractive hybridization
    Labrecque, Benoit
    Mathieu, Olivier
    Bordignon, Vilceu
    Murphy, Bruce D.
    Palin, Marie-France
    COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2009, 4 (01): : 32 - 44
  • [42] Identification of Differentially Expressed Genes During Ethylene Climacteric of Melon Fruit by Suppression Subtractive Hybridization
    Gao Feng
    Niu Yi-ding
    Hao Jin-feng
    Bade, Rengui
    Zhang Li-quan
    Hasi, Agula
    JOURNAL OF INTEGRATIVE AGRICULTURE, 2013, 12 (08) : 1431 - 1440
  • [43] Identification of Differentially Expressed Genes in the Salivary Gand of Rhipicephalus haemaphysaloides by the Suppression Subtractive Hybridization Approach
    Xiang Fei-yu
    Zhou Yong-zhi
    Zhou Jin-lin
    JOURNAL OF INTEGRATIVE AGRICULTURE, 2012, 11 (09) : 1528 - 1536
  • [44] Identification of genes differentially expressed in glioblastoma versus pilocytic astrocytoma using Suppression Subtractive Hybridization
    Colin, C
    Baeza, N
    Bartoli, C
    Fina, F
    Eudes, N
    Nanni, I
    Martin, PM
    Ouafik, L
    Figarella-Branger, D
    ONCOGENE, 2006, 25 (19) : 2818 - 2826
  • [45] Identification of Differentially Expressed Genes During Ethylene Climacteric of Melon Fruit by Suppression Subtractive Hybridization
    GAO Feng
    NIU Yi-ding
    HAO Jin-feng
    BADE Rengui
    ZHANG Li-quan
    HASIAgula
    Journal of Integrative Agriculture, 2013, 12 (08) : 1431 - 1440
  • [46] Identification of genes differentially expressed in human hepatocellular carcinoma by a modified suppression subtractive hybridization method
    Dong, XY
    Pang, XW
    Yu, ST
    Su, YR
    Wang, HC
    Yin, YH
    Wang, YD
    Chen, WF
    INTERNATIONAL JOURNAL OF CANCER, 2004, 112 (02) : 239 - 248
  • [47] Identification of differentially expressed genes in omental adipose tissues of obese patients by suppression subtractive hybridization
    Qiu, Jie
    Ni, Yu-Hui
    Gong, Hai-Xia
    Fei, Li
    Pan, Xiao-Qin
    Guo, Mei
    Chen, Rong-Hua
    Guo, Xi-Rong
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2007, 352 (02) : 469 - 478
  • [48] Identification and cloning of differentially expressed genes by long-distance differential display
    Jurecic, R
    Nachtman, RG
    Colicos, SM
    Belmont, JW
    ANALYTICAL BIOCHEMISTRY, 1998, 259 (02) : 235 - 244
  • [49] Identification of Genes Differentially Expressed Between Midgestational and Postnatal Mouse Skin Through Suppression Subtractive Hybridization
    Wang, M. M. Peng
    Tang, Shengjian
    Huang, Yong
    Lin, Lixin
    Huo, Ran
    WOUNDS-A COMPENDIUM OF CLINICAL RESEARCH AND PRACTICE, 2016, 28 (01): : E1 - E5
  • [50] Identification of Differentially Expressed Genes in In vivo vs In vitro Equine Blastocysts by Suppression Subtractive Hybridization (SSH)
    Smits, K.
    Goossens, K.
    Van Soom, A.
    Peelman, L.
    REPRODUCTION IN DOMESTIC ANIMALS, 2009, 44 : 75 - 75