Transcriptome Analysis of Four Arabidopsis thaliana Mediator Tail Mutants Reveals Overlapping and Unique Functions in Gene Regulation

被引:17
|
作者
Dolan, Whitney L.
Chapple, Clint
机构
[1] Dept Biochem, W Lafayette, IN 47907 USA
[2] Purdue Ctr Plant Biol, W Lafayette, IN 47907 USA
来源
G3-GENES GENOMES GENETICS | 2018年 / 8卷 / 09期
关键词
Mediator; Arabidopsis; transcription regulation; gene expression; RNA-POLYMERASE-II; MEDIATOR COMPLEX SUBUNIT16; SACCHAROMYCES-CEREVISIAE; IN-VIVO; PREINITIATION COMPLEX; PLANT DEVELOPMENT; KEY REGULATOR; EXPRESSION; YEAST; MODULE;
D O I
10.1534/g3.118.200573
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Mediator complex is a central component of transcriptional regulation in Eukaryotes. The complex is structurally divided into four modules known as the head, middle, tail and kinase modules, and in Arabidopsis thaliana, comprises 28-34 subunits. Here, we explore the functions of four Arabidopsis Mediator tail subunits, MED2, MED5a/b, MED16, and MED23, by comparing the impact of mutations in each on the Arabidopsis transcriptome. We find that these subunits affect both unique and overlapping sets of genes, providing insight into the functional and structural relationships between them. The mutants primarily exhibit changes in the expression of genes related to biotic and abiotic stress. We find evidence for a tissue specific role for MED23, as well as in the production of alternative transcripts. Together, our data help disentangle the individual contributions of these MED subunits to global gene expression and suggest new avenues for future research into their functions.
引用
收藏
页码:3093 / 3108
页数:16
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