An RNA Hairpin Sequesters the Ribosome Binding Site of the Homing Endonuclease mobE Gene

被引:6
|
作者
Gibb, Ewan A. [1 ]
Edgell, David R. [1 ]
机构
[1] Univ Western Ontario, Dept Biochem, Schulich Sch Med & Dent, London, ON N6A 5C1, Canada
关键词
GROUP-I INTRONS; MARKER EXCLUSION; EXPRESSION; REDUCTASE; PROTEINS; HOMOLOGY; SEQUENCE;
D O I
10.1128/JB.01751-08
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Previous transcript mapping of the bacteriophage Aeh1 nrd operon revealed a predicted RNA hairpin upstream of the homing endonuclease mobE gene. We enzymatically mapped the hairpin, showing that the mobE ribosome binding site is sequestered. Cloning of the hairpin upstream of lacZ resulted in reduced beta-galactosidase activity, consistent with translational regulation.
引用
收藏
页码:2409 / 2413
页数:5
相关论文
共 50 条
  • [21] Functionally distinct nucleic acid binding sites for a group I intron encoded RNA maturase/DNA homing endonuclease
    Chatterjee, P
    Brady, KL
    Solem, A
    Ho, YG
    Caprara, MG
    JOURNAL OF MOLECULAR BIOLOGY, 2003, 329 (02) : 239 - 251
  • [22] The trp RNA-binding attenuation protein regulates TrpG synthesis by binding to the trpG ribosome binding site of Bacillus subtilis
    Du, HS
    Tarpey, R
    Babitzke, P
    JOURNAL OF BACTERIOLOGY, 1997, 179 (08) : 2582 - 2586
  • [23] AFFINITY LABEL FOR TRANSFER-RNA BINDING-SITE ON ESCHERICHIA-COLI RIBOSOME
    CZERNILOFSKY, AP
    KUECHLER, E
    BIOCHIMICA ET BIOPHYSICA ACTA, 1972, 272 (04) : 667 - +
  • [24] The crystal structure of the gene targeting homing endonuclease I-SceI reveals the origins of its target site specificity
    Moure, CM
    Gimble, FS
    Quiocho, FA
    JOURNAL OF MOLECULAR BIOLOGY, 2003, 334 (04) : 685 - 695
  • [25] EFFECT OF RIBOSOME BINDING-SITE ON GENE-EXPRESSION IN ESCHERICHIA-COLI
    CURRY, KA
    TOMICH, CSC
    DNA-A JOURNAL OF MOLECULAR & CELLULAR BIOLOGY, 1988, 7 (03): : 173 - 179
  • [26] Metabolic pathway optimization using ribosome binding site variants and combinatorial gene assembly
    Farnaz F. Nowroozi
    Edward E. K. Baidoo
    Simon Ermakov
    Alyssa M. Redding-Johanson
    Tanveer S. Batth
    Christopher J. Petzold
    Jay D. Keasling
    Applied Microbiology and Biotechnology, 2014, 98 : 1567 - 1581
  • [27] Metabolic pathway optimization using ribosome binding site variants and combinatorial gene assembly
    Nowroozi, Farnaz F.
    Baidoo, Edward E. K.
    Ermakov, Simon
    Redding-Johanson, Alyssa M.
    Batth, Tanveer S.
    Petzold, Christopher J.
    Keasling, Jay D.
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2014, 98 (04) : 1567 - 1581
  • [28] The primer binding site on the RNA genome of human and simian immunodeficiency viruses is flanked by an upstream hairpin structure
    Berkhout, B
    NUCLEIC ACIDS RESEARCH, 1997, 25 (20) : 4013 - 4017
  • [29] Generation of a nicking enzyme that stimulates site-specific gene conversion from the I-AniI LAGLIDADG homing endonuclease
    Smith, Audrey McConnell
    Takeuchi, Ryo
    Pellenz, Stefan
    Davis, Luther
    Maizels, Nancy
    Monnat, Raymond J., Jr.
    Stoddard, Barry L.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (13) : 5099 - 5104
  • [30] SYNTHESIS AND CLONING OF THE DNA FRAGMENT CONTAINING A PUTATIVE SITE FOR EUKARYOTIC MESSENGER-RNA BINDING TO RIBOSOME
    SINYAKOV, AN
    SERPINSKI, OD
    DANILYUK, NK
    BIOORGANICHESKAYA KHIMIYA, 1986, 12 (05): : 655 - 660