IDENTIFYING FUSION EVENTS IN FLUORESCENCE MICROSCOPY IMAGES

被引:2
|
作者
Godinez, W. J. [1 ,2 ]
Lampe, M. [3 ]
Woerz, S. [1 ,2 ]
Eils, R. [1 ,2 ]
Mueller, B. [3 ]
Rohr, K. [1 ,2 ]
机构
[1] Heidelberg Univ, BIOQUANT, IPMB, Neuenheimer Feld 267, D-69120 Heidelberg, Germany
[2] DKFZ Heidelberg, Biomed Comp Vis Grp, Dept Bioinformat & Funct Genom, D-69120 Heidelberg, Germany
[3] Heidelberg Univ, Dept Virol, D-69120 Heidelberg, Germany
来源
2009 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1 AND 2 | 2009年
关键词
Biomedical imaging; microscopy images; tracking; virus particles; behavior identification; TRACKING; ALGORITHM; DYNAMICS; MOTION;
D O I
10.1109/ISBI.2009.5193266
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
We are investigating the dynamical relationships exhibited by virus particles via fluorescence time-lapse microscopy. To obtain a quantitative description of each particle over time, these objects are tracked. To derive an explicit characterization of each particle as well as to identify interesting transient behaviors, the intensity over time of each particle needs to be analyzed. We have developed an approach based on hybrid stochastic systems for identifying behaviors of interest. We employ a hybrid particle filter for estimating the behavior of individual particles. The approach has been successfully applied to particles tracked in synthetic image sequences as well as in real image sequences displaying HIV-1 particles.
引用
收藏
页码:1170 / +
页数:2
相关论文
共 50 条
  • [21] A DELAY IN MEMBRANE-FUSION - LAG TIMES OBSERVED BY FLUORESCENCE MICROSCOPY OF INDIVIDUAL FUSION EVENTS INDUCED BY AN ELECTRIC-FIELD PULSE
    DIMITROV, DS
    SOWERS, AE
    BIOCHEMISTRY, 1990, 29 (36) : 8337 - 8344
  • [22] Identifying lymphoma in microscopy images with Classificational Cellular Automata
    Povalej, Petra
    Verlic, Mateja
    Kokol, Peter
    Sanchez, Jose L.
    Sigut, Jose F.
    19TH IEEE INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS, PROCEEDINGS, 2006, : 309 - +
  • [23] Molecular events in single cells revealed by fluorescence microscopy
    Femino, AM
    Singer, RH
    ELECTRON MICROSCOPY 1998, VOL 4: BIOLOGICAL SCIENCES, 1998, : 441 - 442
  • [24] IMAGE FUSION FOR AUTOFOCUSING IN FLUORESCENCE MICROSCOPY FOR TUBERCULOSIS SCREENING
    Dendere, Ronald
    Osibote, Otolorin A.
    Krishnan, Sriram
    Douglas, Tania S.
    2011 8TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, 2011, : 1383 - 1386
  • [25] VIDEO FLUORESCENCE MICROSCOPY OF VESICLE FUSION WITH PLANAR MEMBRANES
    NILES, WD
    COHEN, FS
    BIOPHYSICAL JOURNAL, 1987, 51 (02) : A44 - A44
  • [26] Deep probabilistic tracking of particles in fluorescence microscopy images
    Spilger, Roman
    Lee, Ji-Young
    Chagin, Vadim O.
    Schermelleh, Lothar
    Cardoso, M. Cristina
    Bartenschlager, Ralf
    Rohr, Karl
    Medical Image Analysis, 2021, 72
  • [27] Automatic Detection of Filopodia from Fluorescence Microscopy Images
    Nilufar, Sharmin
    Morrow, Anne A.
    Lee, Jonathan M.
    Perkins, Theodore J.
    PROCEEDINGS IWBBIO 2013: INTERNATIONAL WORK-CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING, 2013, : 251 - +
  • [28] Automated neurite labeling and analysis in fluorescence microscopy images
    Xiong, Guanglei
    Zhou, Xiaobo
    Degterev, Alexei
    Ji, Liang
    Wong, Stephen T. C.
    CYTOMETRY PART A, 2006, 69A (06) : 494 - 505
  • [29] ACQUISITION AND QUANTITATIVE-ANALYSIS OF IMAGES IN FLUORESCENCE MICROSCOPY
    ALBE, X
    DEUGNIER, MA
    BISCONTE, JC
    BIOLOGY OF THE CELL, 1984, 52 (03) : A127 - A127
  • [30] Comparison of Segmentation Algorithms For Fluorescence Microscopy Images of Cells
    Dima, Alden A.
    Elliott, John T.
    Filliben, James J.
    Halter, Michael
    Peskin, Adele
    Bernal, Javier
    Kociolek, Marcin
    Brady, Mary C.
    Tang, Hai C.
    Plant, Anne L.
    CYTOMETRY PART A, 2011, 79A (07) : 545 - 559