Optimal non-adaptive probabilistic group testing in general sparsity regimes

被引:5
|
作者
Bay, Wei Heng [1 ,2 ,3 ]
Scarlett, Jonathan [1 ,2 ,3 ]
Price, Eric [4 ]
机构
[1] Natl Univ Singapore, Dept Comp Sci, 15 Comp Dr, Singapore 117417, Singapore
[2] Natl Univ Singapore, Dept Math, 10 Lower Kent Ridge Rd, Singapore 119076, Singapore
[3] Natl Univ Singapore, Inst Data Sci, 3 Res Link, Singapore 117602, Singapore
[4] Univ Texas Austin, Dept Comp Sci, 2317 Speedway, Austin, TX 78712 USA
基金
美国国家科学基金会;
关键词
group testing; sparsity; information-theoretic limits; DEFECTIVE MEMBERS; BOUNDS;
D O I
10.1093/imaiai/iaab020
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
In this paper, we consider the problem of noiseless non-adaptive probabilistic group testing, in which the goal is high-probability recovery of the defective set. We show that in the case of n items among which k are defective, the smallest possible number of tests equals min{C(k,n)k log n, n} up to lower-order asymptotic terms, where C-k,C-n is a uniformly bounded constant (varying depending on the scaling of k with respect to n) with a simple explicit expression. The algorithmic upper bound follows from a minor adaptation of an existing analysis of the Definite Defectives algorithm, and the algorithm-independent lower bound builds on existing works for the regimes k <= n(1-Omega(1)) and k = circle minus(n). In sufficiently sparse regimes (including k = o(n/lg n)),our main result generalizes that of Coja-Oghlan et al. (2020) by avoiding the assumption k <= n(1-Omega(1)), whereas in sufficiently dense regimes (including k = omega(n/log n)), our main result shows that individual testing is asymptotically optimal for any non-zero target success probability, thus strengthening an existing result of Aldridge (2019, IEEE Trans. Inf. Theory, 65, 2058-2061) in terms of both the error probability and the assumed scaling of k.
引用
收藏
页码:1037 / 1053
页数:17
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