Gene regulation and chromatin organization: relevance of cohesin mutations to human disease

被引:50
|
作者
Watrin, Erwan [1 ,2 ]
Kaiser, Frank J. [3 ]
Wendt, Kerstin S. [4 ]
机构
[1] Ctr Natl Rech Sci, UMR 6290, Rennes, France
[2] Univ Rennes 1, Inst Genet & Dev Rennes, SFR BIOSIT, Rennes, France
[3] Univ Lubeck, Sekt Funkt Genet, Inst Humangenet Lubeck, Lubeck, Germany
[4] Erasmus MC, Dept Cell Biol, Rotterdam, Netherlands
关键词
DE-LANGE-SYNDROME; ACUTE MYELOID-LEUKEMIA; CCCTC-BINDING FACTOR; BLADDER-CANCER; HUMAN GENOME; EXPRESSION; ARCHITECTURE; CTCF; SEPARATION; LOCUS;
D O I
10.1016/j.gde.2015.12.004
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Consistent with the diverse roles of the cohesin complex in chromosome biology, mutations in genes encoding cohesin and its regulators are found in different types of cancer and in developmental disorders such as Cornelia de Lange Syndrome. It is so far considered that the defects caused by these mutations result from altered function of cohesin in regulating gene expression during development. Chromatin conformation analyses have established the importance of cohesin for the architecture of developmental gene clusters and in vivo studies in mouse and zebrafish demonstrated how cohesin defects lead to gene misregulation and to malformations similar to the related human syndromes. Here we present our current knowledge on cohesin's involvement in gene expression, highlighting molecular and mechanistic consequences of pathogenic mutations in the Cornelia de Lange syndrome.
引用
收藏
页码:59 / 66
页数:8
相关论文
共 50 条
  • [42] Cohesinopathy mutations disrupt the subnuclear organization of chromatin
    Gard, Scarlett
    Light, William
    Xiong, Bo
    Bose, Tania
    McNairn, Adrian J.
    Harris, Bethany
    Fleharty, Brian
    Seidel, Chris
    Brickner, Jason H.
    Gerton, Jennifer L.
    JOURNAL OF CELL BIOLOGY, 2009, 187 (04): : 455 - 462
  • [43] Cohesinopathy Mutations Disrupt Subnuclear Organization of Chromatin
    McNairn, Adrian
    Gard, Scarlett
    Light, William
    Bose, Tania
    Xiong, Bo
    Ruan, Chun
    Zueckert-Gaudenz, Karin
    Gogol, Madelaine
    Fleharty, Brian
    Seidel, Chris
    Brickner, Jason
    Gerton, Jennifer L.
    AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2010, 152A (07) : 1637 - 1637
  • [44] Landscape of cohesin-mediated chromatin loops in the human genome
    Fabian Grubert
    Rohith Srivas
    Damek  V Spacek
    Maya Kasowski
    Mariana Ruiz-Velasco
    Nasa Sinnott-Armstrong
    Peyton Greenside
    Anil Narasimha
    Qing Liu
    Benjamin Geller
    Akshay Sanghi
    Michael Kulik
    Silin Sa
    Marlene Rabinovitch
    Anshul Kundaje
    Stephen Dalton
    Judith B. Zaugg
    Michael Snyder
    Nature, 2020, 583 : 737 - 743
  • [45] Landscape of cohesin-mediated chromatin loops in the human genome
    Grubert, F.
    Srivas, R.
    Spacek, D.
    Kasowski, M.
    Ruiz-Velasco, M.
    Sinnott-Armstrong, N.
    Greenside, P.
    Narasimha, A.
    Liu, Q.
    Geller, B.
    Sanghi, A.
    Kulik, M.
    Sa, S.
    Rabinovitch, M.
    Kundaje, A.
    Dalton, S.
    Zaugg, J.
    Snyder, M.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2020, 28 (SUPPL 1) : 72 - 72
  • [46] Landscape of cohesin-mediated chromatin loops in the human genome
    Grubert, Fabian
    Srivas, Rohith
    Spacek, Damek, V
    Kasowski, Maya
    Ruiz-Velasco, Mariana
    Sinnott-Armstrong, Nasa
    Greenside, Peyton
    Narasimha, Anil
    Liu, Qing
    Geller, Benjamin
    Sanghi, Akshay
    Kulik, Michael
    Sa, Silin
    Rabinovitch, Marlene
    Kundaje, Anshul
    Dalton, Stephen
    Zaugg, Judith B.
    Snyder, Michael
    NATURE, 2020, 583 (7818) : 737 - +
  • [47] A chromatin remodelling complex that loads cohesin onto human chromosomes
    Mohamed-Ali Hakimi
    Daniel A. Bochar
    John A. Schmiesing
    Yuanshu Dong
    Orr G. Barak
    David W. Speicher
    Kyoko Yokomori
    Ramin Shiekhattar
    Nature, 2002, 418 : 994 - 998
  • [48] A chromatin remodelling complex that loads cohesin onto human chromosomes
    Hakimi, MA
    Bochar, DA
    Schmiesing, JA
    Dong, YS
    Barak, OG
    Speicher, DW
    Yokomori, K
    Shiekhattar, R
    NATURE, 2002, 418 (6901) : 994 - 998
  • [49] DNA repair in organelles: Pathways, organization, regulation, relevance in disease and aging
    Boesch, Pierre
    Weber-Lotfi, Frederique
    Ibrahim, Noha
    Tarasenko, Vladislav
    Cosset, Anne
    Paulus, Francois
    Lightowlers, Robert N.
    Dietrich, Andre
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2011, 1813 (01): : 186 - 200
  • [50] A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection
    Deng, Zhong
    Wang, Zhuo
    Stong, Nick
    Plasschaert, Robert
    Moczan, Aliah
    Chen, Horng-Shen
    Hu, Sufeng
    Wikramasinghe, Priyankara
    Davuluri, Ramana V.
    Bartolomei, Marisa S.
    Riethman, Harold
    Lieberman, Paul M.
    EMBO JOURNAL, 2012, 31 (21): : 4165 - 4178