Landscape of cohesin-mediated chromatin loops in the human genome

被引:0
|
作者
Grubert, F. [1 ]
Srivas, R. [1 ]
Spacek, D. [1 ]
Kasowski, M. [1 ]
Ruiz-Velasco, M. [2 ]
Sinnott-Armstrong, N. [1 ]
Greenside, P. [1 ]
Narasimha, A. [1 ]
Liu, Q. [1 ]
Geller, B. [1 ]
Sanghi, A. [1 ]
Kulik, M. [3 ]
Sa, S. [1 ]
Rabinovitch, M. [1 ]
Kundaje, A. [1 ]
Dalton, S. [3 ]
Zaugg, J. [2 ]
Snyder, M. [1 ]
机构
[1] Stanford Univ, Stanford, CA 94305 USA
[2] EMBL, Heidelberg, Germany
[3] Univ Georgia, Athens, GA 30602 USA
关键词
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
C13.1
引用
收藏
页码:72 / 72
页数:1
相关论文
共 50 条
  • [1] Landscape of cohesin-mediated chromatin loops in the human genome
    Grubert, Fabian
    Srivas, Rohith
    Spacek, Damek, V
    Kasowski, Maya
    Ruiz-Velasco, Mariana
    Sinnott-Armstrong, Nasa
    Greenside, Peyton
    Narasimha, Anil
    Liu, Qing
    Geller, Benjamin
    Sanghi, Akshay
    Kulik, Michael
    Sa, Silin
    Rabinovitch, Marlene
    Kundaje, Anshul
    Dalton, Stephen
    Zaugg, Judith B.
    Snyder, Michael
    NATURE, 2020, 583 (7818) : 737 - +
  • [2] Landscape of cohesin-mediated chromatin loops in the human genome
    Fabian Grubert
    Rohith Srivas
    Damek  V Spacek
    Maya Kasowski
    Mariana Ruiz-Velasco
    Nasa Sinnott-Armstrong
    Peyton Greenside
    Anil Narasimha
    Qing Liu
    Benjamin Geller
    Akshay Sanghi
    Michael Kulik
    Silin Sa
    Marlene Rabinovitch
    Anshul Kundaje
    Stephen Dalton
    Judith B. Zaugg
    Michael Snyder
    Nature, 2020, 583 : 737 - 743
  • [3] Cohesin-Mediated Chromatin Interactions and Autoimmunity
    Chandrasekaran, Venkataragavan
    Oparina, Nina
    Garcia-Bonete, Maria-Jose
    Wasen, Caroline
    Erlandsson, Malin C.
    Malmhall-Bah, Eric
    Andersson, Karin M. E.
    Jensen, Maja
    Silfverswaerd, Sofia T.
    Katona, Gergely
    Bokarewa, Maria I.
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [4] Prediction of cell-type-specific cohesin-mediated chromatin loops based on chromatin state
    Liu, Li
    Jia, Ranran
    Hou, Rui
    Huang, Chengbing
    METHODS, 2024, 226 : 151 - 160
  • [5] CTCF and R-loops are boundaries of cohesin-mediated DNA looping
    Zhang, Hongshan
    Shi, Zhubing
    Banigan, Edward J.
    Kim, Yoori
    Yu, Hongtao
    Bai, Xiao-chen
    Finkelstein, Ilya J.
    MOLECULAR CELL, 2023, 83 (16) : 2856 - +
  • [6] Cohesin-mediated chromatin interactions-into the third dimension of gene regulation
    Sofueva, Sevil
    Hadjur, Suzana
    BRIEFINGS IN FUNCTIONAL GENOMICS, 2012, 11 (03) : 205 - 216
  • [8] The Accidental Ally: Nucleosome Barriers Can Accelerate Cohesin-Mediated Loop Formation in Chromatin
    Maji, Ajoy
    Padinhateeri, Ranjith
    Mitra, Mithun K.
    BIOPHYSICAL JOURNAL, 2020, 119 (11) : 2316 - 2325
  • [9] ChIPr: accurate prediction of cohesin-mediated 3D genome organization from 2D chromatin features
    Abbas, Ahmed
    Chandratre, Khyati
    Gao, Yunpeng
    Yuan, Jiapei
    Zhang, Michael Q.
    Mani, Ram S.
    GENOME BIOLOGY, 2024, 25 (01)
  • [10] Dynamic cohesin-mediated chromatin architecture controls epithelial-mesenchymal plasticity in cancer
    Yun, Jiyeon
    Song, Sang-Hyun
    Kim, Hwang-Phill
    Han, Sae-Won
    Yi, Eugene C.
    Kim, Tae-You
    EMBO REPORTS, 2016, 17 (09) : 1343 - 1359