Icy: an open bioimage informatics platform for extended reproducible research

被引：0
|
作者：
de Chaumont, Fabrice [1 ]
Dallongeville, Stephane [1 ]
Chenouard, Nicolas [1 ]
Herve, Nicolas [1 ]
Pop, Sorin [1 ]
Provoost, Thomas [1 ]
Meas-Yedid, Vannary [1 ]
Pankajakshan, Praveen [1 ]
Lecomte, Timothee [1 ]
Le Montagner, Yoann [1 ]
Lagache, Thibault [1 ]
Dufour, Alexandre [1 ]
Olivo-Marin, Jean-Christophe [1 ]
机构：
[1] Inst Pasteur, CNRS, Unite Rech Associee 2582, Unite Anal Images Quantitat, Paris, France
来源：
NATURE METHODS | 2012年 / 9卷 / 07期
关键词：
ENTAMOEBA-HISTOLYTICA; TRACKING; MICROSCOPY; MODEL; IMAGES; CELLS;
D O I：
10.1038/NMETH.2075
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
Current research in biology uses evermore complex computational and imaging tools. Here we describe Icy, a collaborative bioimage informatics platform that combines a community website for contributing and sharing tools and material, and software with a high-end visual programming framework for seamless development of sophisticated imaging workflows. I Icy extends the reproducible research principles, by encouraging and facilitating the reusability, modularity, standardization and management of algorithms and protocols. Icy is free, open-source and available at http://icy.bioimageanalysis.org/.
引用
收藏
页码：690 / 696
页数：7
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