Specific, simple and rapid detection of porcine circovirus type 2 using the loop-mediated isothermal amplification method

被引:25
|
作者
Zhao, Kai [1 ,3 ]
Shi, Wei [4 ]
Han, Fangting [4 ]
Xu, Yan [4 ]
Zhu, Lianlong [1 ,3 ]
Zou, Yong [2 ,3 ]
Wu, Xiao [1 ,3 ]
Zhu, Hong [1 ,3 ]
Tan, Furong [1 ,3 ]
Tao, Shiru [1 ,3 ]
Tang, Xueming [1 ,3 ]
机构
[1] Shanghai Acad Agr Sci, Biotechnol Res Inst, Shanghai 201106, Peoples R China
[2] Shanghai Acad Agr Sci, Inst Anim Sci & Vet Med, Shanghai 201106, Peoples R China
[3] Shanghai Acad Agr Sci, Key Lab Agr Genet & Breeding, Shanghai 201106, Peoples R China
[4] Shanghai Normal Univ, Coll Life & Environm Sci, Shanghai 200234, Peoples R China
关键词
MULTISYSTEMIC WASTING SYNDROME; REAL-TIME PCR; VIRUS; QUANTITATION; DNA; H5;
D O I
10.1186/1743-422X-8-126
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Background: Porcine circovirus type 2 (PCV2) is the causative agent of postweaning multisystemic wasting syndrome (PMWS), and porcine dermatitis and nephropathy syndrome (PDNS). It has caused heavy losses in global agriculture in recent decades. Rapid detection of PCV2 is very important for the effective prophylaxis and treatment of PMWS. Results: A loop-mediated isothermal amplification (LAMP) assay was used to detect PCV2 in this study. Three pairs of primers were specially designed for recognizing eight distinct sequences of the ORF2 gene. This gene lies in the PCV2 virus genome sequence, and encodes the Rep protein that is involved in virus replication. Time and temperature conditions for amplification of PCV2 genes were optimized to be 55 min at 59 degrees C. The analysis of clinical samples indicated that the LAMP method was highly sensitive. The detection limit for PCV2 by the LAMP assay was 10 copies, whereas the limit by conventional PCR was 1000 copies. The assay did not cross-react with PCV1, porcine reproductive and respiratory syndrome virus, porcine epidemic diarrhea virus, transmissible gastroenteritis of pigs virus or rotavirus. When 110 samples were tested using the established LAMP system, 95 were detected as positive. Conclusion: The newly developed LAMP detection method for PCV2 was more specific, sensitive, rapid and simple than before. It complements and extends previous methods for PCV2 detection and provides an alternative approach for detection of PCV2.
引用
收藏
页数:7
相关论文
共 50 条
  • [31] Rapid and specific detection of Tilletia indica using loop-mediated isothermal DNA amplification
    Y. Gao
    M. K. Tan
    Y. G. Zhu
    Australasian Plant Pathology, 2016, 45 : 361 - 367
  • [32] Rapid and specific detection of Tilletia indica using loop-mediated isothermal DNA amplification
    Gao, Y.
    Tan, M. K.
    Zhu, Y. G.
    AUSTRALASIAN PLANT PATHOLOGY, 2016, 45 (04) : 361 - 367
  • [33] Simple method for the detection of vibro parahaemolyticus by loop-mediated isothermal amplification
    Zhao, Xihong
    He, Xiaowei
    Yang, Liansheng
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 238 : 274 - 274
  • [34] Rapid and simple detection of eight major periodontal pathogens by the loop-mediated isothermal amplification method
    Miyagawa, Junko
    Maeda, Hiroshi
    Murauchi, Toshimitsu
    Kokeguchi, Susumu
    Yamabe, Kokoro
    Tanimoto, Ichiro
    Nishimura, Fusanori
    Fukui, Kazuhiro
    Takashiba, Shogo
    FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY, 2008, 53 (03): : 314 - 321
  • [35] An accurate, rapid and simple loop-mediated isothermal amplification method for Explanatum explanatum detection in animals
    Rashid, Muhammad
    Rashid, Muhammad Imran
    Ali, Qasim
    VETERINARY RESEARCH FORUM, 2021, 12 (03) : 377 - 381
  • [36] A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
    Xie, Liji
    Xie, Zhixun
    Zhao, Guangyuan
    Liu, Jiabo
    Pang, Yaoshan
    Deng, Xianwen
    Xie, Zhiqin
    Fan, Qing
    Luo, Sisi
    VIROLOGY JOURNAL, 2014, 11
  • [37] A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
    Liji Xie
    Zhixun Xie
    Guangyuan Zhao
    Jiabo Liu
    Yaoshan Pang
    Xianwen Deng
    Zhiqin Xie
    Qing Fan
    Sisi Luo
    Virology Journal, 11
  • [38] Loop-mediated Isothermal Amplification Method for Rapid Detection of Shigella dysenteriae
    Zhong, Qingping
    Wang, Li
    Wang, Bin
    Chen, Hongyuan
    MEDICAL MATERIALS AND ENGINEERING, 2012, 140 : 369 - +
  • [39] Simple,rapid and sensitive detection of Toxoplasma gondii by loop-mediated isothermal amplification
    Zhang, J.
    Jiang, M.
    CLINICAL CHEMISTRY, 2009, 55 (06) : A165 - A166
  • [40] Loop-mediated isothermal amplification for the rapid detection of Salmonella
    Hara-Kudo, Y
    Yoshino, M
    Kojima, T
    Ikedo, M
    FEMS MICROBIOLOGY LETTERS, 2005, 253 (01) : 155 - 161