The Zebra Finch genome and avian genomics in the wild
被引:13
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作者:
Balakrishnan, Christopher N.
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机构:
Univ Illinois, Dept Cell & Dev Biol, Urbana, IL 61820 USA
Univ Illinois, Inst Genom Biol, Urbana, IL 61820 USAUniv Illinois, Dept Cell & Dev Biol, Urbana, IL 61820 USA
Balakrishnan, Christopher N.
[1
,2
]
Edwards, Scott V.
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机构:
Harvard Univ, Museum Comparat Zool, Cambridge, MA 02138 USA
Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USAUniv Illinois, Dept Cell & Dev Biol, Urbana, IL 61820 USA
Edwards, Scott V.
[3
,4
]
Clayton, David F.
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机构:
Univ Illinois, Dept Cell & Dev Biol, Urbana, IL 61820 USA
Univ Illinois, Inst Genom Biol, Urbana, IL 61820 USAUniv Illinois, Dept Cell & Dev Biol, Urbana, IL 61820 USA
Clayton, David F.
[1
,2
]
机构:
[1] Univ Illinois, Dept Cell & Dev Biol, Urbana, IL 61820 USA
[2] Univ Illinois, Inst Genom Biol, Urbana, IL 61820 USA
[3] Harvard Univ, Museum Comparat Zool, Cambridge, MA 02138 USA
[4] Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
WHITE-THROATED SPARROW;
MAJOR HISTOCOMPATIBILITY COMPLEX;
GENETIC-LINKAGE MAP;
CLASS IIB GENES;
ZONOTRICHIA-ALBICOLLIS;
TAENIOPYGIA-GUTTATA;
CHROMOSOMAL-POLYMORPHISM;
PHYLOGEOGRAPHY;
BIRD;
SEQUENCE;
D O I:
10.1071/MU09087
中图分类号:
Q95 [动物学];
学科分类号:
071002 ;
摘要:
The Zebra Finch (Taeniopygia guttata) is the first species of passerine bird with a complete genome sequence, making it an exciting time for avian evolutionary biology. Native to Australia and the Lesser Sunda Islands, this species has long played an important role in the study of ecology, behaviour and neuroscience. With the sequencing of its genome, the Zebra Finch now also represents an important model system for evolutionary and population genomics. The production of a genome sequence for the Zebra Finch will have far-reaching impacts on the study of avian biology. Here we discuss the genomic resources available for the Zebra Finch, including the genome sequence itself, and some of the ways in which they will facilitate the study of avian diversity. We also highlight recent examples from the literature that have already begun to leverage Zebra Finch genomic tools towards the study of birds in nature.
机构:
RIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, JapanRIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
Mak, Siu-Shan
Wrabel, Anna
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RIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
RIKEN, Ctr Dev Biol, Lab Early Embryogenesis, Chuo Ku, Kobe, Hyogo 6500047, JapanRIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
Wrabel, Anna
Nagai, Hiroki
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RIKEN, Ctr Dev Biol, Lab Early Embryogenesis, Chuo Ku, Kobe, Hyogo 6500047, JapanRIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
Nagai, Hiroki
Ladher, Raj K.
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机构:
RIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
Natl Ctr Biol Sci, Bangalore, Karnataka, IndiaRIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
Ladher, Raj K.
Sheng, Guojun
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机构:
RIKEN, Ctr Dev Biol, Lab Early Embryogenesis, Chuo Ku, Kobe, Hyogo 6500047, JapanRIKEN, Ctr Dev Biol, Lab Sensory Dev, Chuo Ku, Kobe, Hyogo 6500047, Japan
机构:
Univ Calif Los Angeles, Dept Physiol Sci, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Brain Res Inst, Neuroendocrinol Lab, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Physiol Sci, Los Angeles, CA 90095 USA
Itoh, Yuichiro
Kampf, Kathy
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机构:
Univ Calif Los Angeles, Dept Physiol Sci, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Brain Res Inst, Neuroendocrinol Lab, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Physiol Sci, Los Angeles, CA 90095 USA
Kampf, Kathy
Arnold, Arthur P.
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机构:
Univ Calif Los Angeles, Dept Physiol Sci, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Brain Res Inst, Neuroendocrinol Lab, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Physiol Sci, Los Angeles, CA 90095 USA