Comparative genomic analysis of novel bacteriophages infecting Vibrio parahaemolyticus isolated from western and southern coastal areas of Korea
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作者:
Yu, Junhyeok
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Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Gachon Univ, Dept Food & Biotechnol, Sungnam 13120, South KoreaKorea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Yu, Junhyeok
[1
,2
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Lim, Jeong-A
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Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South KoreaKorea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Lim, Jeong-A
[1
]
Kwak, Su-Jin
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Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South KoreaKorea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Kwak, Su-Jin
[1
]
Park, Jong-Hyun
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Gachon Univ, Dept Food & Biotechnol, Sungnam 13120, South KoreaKorea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Park, Jong-Hyun
[2
]
Chang, Hyun-Joo
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Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Korea Res Inst Chem Technol, Ctr Convergent Res Emerging Virus Infect, 141 Gajeong Ro, Daejeon 34114, South KoreaKorea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
Chang, Hyun-Joo
[1
,3
]
机构:
[1] Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
[2] Gachon Univ, Dept Food & Biotechnol, Sungnam 13120, South Korea
[3] Korea Res Inst Chem Technol, Ctr Convergent Res Emerging Virus Infect, 141 Gajeong Ro, Daejeon 34114, South Korea
Vibrio parahaemolyticus, a foodborne pathogen, has become resistant to antibiotics. Therefore, alternative bio-control agents such bacteriophage are urgently needed for its control. Six novel bacteriophages specific to V. parahaemolyticus (vB_VpaP_KF1 similar to 2, vB_VpaS_KF3 similar to 6) were characterized at the molecular level in this study. Genomic similarity analysis revealed that these six bacteriophages could be divided into two groups with different genomic features, phylogenetic grouping, and morphologies. Two groups of bacteriophages had their own genes with different mechanisms for infection, assembly, and metabolism. Our results could be used as a future reference to study phage genomics or apply phages in future bio-control studies.
机构:
Seoul Natl Univ, Interdisciplinary Program Bioinformat, 1 Gwanak Ro, Seoul 151742, South Korea
Korea Natl Inst Hlth, Div Biosafety Evaluat & Control, Cheongju 363951, South KoreaSeoul Natl Univ, Interdisciplinary Program Bioinformat, 1 Gwanak Ro, Seoul 151742, South Korea
Kwon, Taesoo
Kim, Won
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Seoul Natl Univ, Interdisciplinary Program Bioinformat, 1 Gwanak Ro, Seoul 151742, South KoreaSeoul Natl Univ, Interdisciplinary Program Bioinformat, 1 Gwanak Ro, Seoul 151742, South Korea
Kim, Won
Cho, Seung-Hak
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Korea Natl Inst Hlth, Div Enter Dis, Ctr Infect Dis, Cheongju 363951, South KoreaSeoul Natl Univ, Interdisciplinary Program Bioinformat, 1 Gwanak Ro, Seoul 151742, South Korea
机构:
Nagoya Univ, Grad Sch Bioagr Sci, Biodynam Lab, Chikusa Ku, Nagoya, Aichi 4648601, JapanNagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, Japan
Ogembo, Javier Gordon
Caoili, Barbara L.
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Nagoya Univ, Grad Sch Bioagr Sci, Biodynam Lab, Chikusa Ku, Nagoya, Aichi 4648601, Japan
Univ Philippines Los Banos, Coll Agr, Laguna 4031, PhilippinesNagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, Japan
Caoili, Barbara L.
Shikata, Masamitsu
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Shimadzu Co Ltd, Kyoto 6048511, JapanNagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, Japan
Shikata, Masamitsu
Chaeychomsri, Sudawan
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Kasetsart Univ, Cent Lab & Greenhouse Complex, Nakhon Pathom, ThailandNagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, Japan
Chaeychomsri, Sudawan
Kobayashi, Michihiro
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Nagoya Univ, Grad Sch Bioagr Sci, Biodynam Lab, Chikusa Ku, Nagoya, Aichi 4648601, JapanNagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, Japan
Kobayashi, Michihiro
Ikeda, Motoko
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Nagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, JapanNagoya Univ, Grad Sch Bioagr Sci, Lab Sericulture & Entomoresources, Chikusa Ku, Nagoya, Aichi 4648601, Japan