Comparative genomic analysis of novel bacteriophages infecting Vibrio parahaemolyticus isolated from western and southern coastal areas of Korea

被引:9
|
作者
Yu, Junhyeok [1 ,2 ]
Lim, Jeong-A [1 ]
Kwak, Su-Jin [1 ]
Park, Jong-Hyun [2 ]
Chang, Hyun-Joo [1 ,3 ]
机构
[1] Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea
[2] Gachon Univ, Dept Food & Biotechnol, Sungnam 13120, South Korea
[3] Korea Res Inst Chem Technol, Ctr Convergent Res Emerging Virus Infect, 141 Gajeong Ro, Daejeon 34114, South Korea
关键词
Vibrio parahaemolyticus; bacteriophage; comparative analysis; genomic similarity; phylogenetic tree; VULNIFICUS; SEQUENCE; DNA;
D O I
10.1007/s00705-018-3756-3
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Vibrio parahaemolyticus, a foodborne pathogen, has become resistant to antibiotics. Therefore, alternative bio-control agents such bacteriophage are urgently needed for its control. Six novel bacteriophages specific to V. parahaemolyticus (vB_VpaP_KF1 similar to 2, vB_VpaS_KF3 similar to 6) were characterized at the molecular level in this study. Genomic similarity analysis revealed that these six bacteriophages could be divided into two groups with different genomic features, phylogenetic grouping, and morphologies. Two groups of bacteriophages had their own genes with different mechanisms for infection, assembly, and metabolism. Our results could be used as a future reference to study phage genomics or apply phages in future bio-control studies.
引用
收藏
页码:1337 / 1343
页数:7
相关论文
共 45 条
  • [21] Comparative Genomic Analysis of Seven Vibrio alginolyticus Strains Isolated From Shrimp Larviculture Water With Emphasis on Chitin Utilization
    Xue, Ming
    Huang, Xuemin
    Xue, Jiawei
    He, Runduan
    Liang, Guojian
    Liang, Huafang
    Liu, Jianyong
    Wen, Chongqing
    FRONTIERS IN MICROBIOLOGY, 2022, 13
  • [22] Genome Analysis of Two Novel Lytic Vibrio maritimus Phages Isolated from the Coastal Surface Seawater of Qingdao, China
    Yuye Han
    Min Wang
    Qian Liu
    Yundan Liu
    Qi Wang
    Xueping Duan
    Lu Liu
    Yong Jiang
    Hongbing Shao
    Cui Guo
    Current Microbiology, 2019, 76 : 1225 - 1233
  • [23] Genome Analysis of Two Novel Lytic Vibrio maritimus Phages Isolated from the Coastal Surface Seawater of Qingdao, China
    Han, Yuye
    Wang, Min
    Liu, Qian
    Liu, Yundan
    Wang, Qi
    Duan, Xueping
    Liu, Lu
    Jiang, Yong
    Shao, Hongbing
    Guo, Cui
    CURRENT MICROBIOLOGY, 2019, 76 (10) : 1225 - 1233
  • [24] Rapid Identification of Vibrio Species Isolated from the Southern Coastal Regions of Korea by MALDI-TOF Mass Spectrometry and Comparison of MALDI Sample Preparation Methods
    Cho, Youngjae
    Kim, Eiseul
    Han, Sun-Kyung
    Yang, Seung-Min
    Kim, Mi-Ju
    Kim, Hyun-Joong
    Kim, Chang-Gyeom
    Choo, Dong-Won
    Kim, Young-Rok
    Kim, Hae-Yeong
    JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 2017, 27 (09) : 1593 - 1601
  • [25] Comparative genomic analysis of enterotoxigenic Escherichia coli O159 strains isolated from diarrheal patients in Korea
    Si-yun Chung
    Taesoo Kwon
    Young-Seok Bak
    Joung Je Park
    Cheorl-Ho Kim
    Seung-Hak Cho
    Won Kim
    Gut Pathogens, 11
  • [26] Comparative genomic analysis of enterotoxigenic Escherichia coli O159 strains isolated from diarrheal patients in Korea
    Chung, Si-yun
    Kwon, Taesoo
    Bak, Young-Seok
    Park, Joung Je
    Kim, Cheorl-Ho
    Cho, Seung-Hak
    Kim, Won
    GUT PATHOGENS, 2019, 11 (1)
  • [27] Evaluation of the pathogenesis of non-typical strain with ?-hemolysin, Vibrio parahaemolyticus 353, isolated from Chinese seafood through comparative genome and transcriptome analysis
    Zha, Fei
    Pang, Rui
    Huang, Shixuan
    Zhang, Jumei
    Wang, Juan
    Chen, Moutong
    Xue, Liang
    Ye, Qinghua
    Wu, Shi
    Yang, Meiyan
    Gu, Qihui
    Ding, Yu
    Zhang, Hao
    Wu, Qingping
    MARINE POLLUTION BULLETIN, 2023, 186
  • [28] Genomic and Transcriptomic Analysis Reveal Multiple Strategies for the Cadmium Tolerance in Vibrio parahaemolyticus N10-18 Isolated from Aquatic Animal Ostrea gigas Thunberg
    Yu, Pan
    Yang, Lianzhi
    Wang, Juanjuan
    Su, Chenli
    Qin, Si
    Zeng, Chaoxi
    Chen, Lanming
    FOODS, 2022, 11 (23)
  • [29] Comparative Genomics Analysis of Vibrio anguillarum Isolated from Lumpfish (Cyclopterus lumpus) in Newfoundland Reveal Novel Chromosomal Organizations
    Vasquez, Ignacio
    Cao, Trung
    Chakraborty, Setu
    Gnanagobal, Hajarooba
    O'Brien, Nicole
    Monk, Jennifer
    Boyce, Danny
    Westcott, Jillian D.
    Santander, Javier
    MICROORGANISMS, 2020, 8 (11) : 1 - 25
  • [30] Genomic characterization and comparative genomic analysis of pathogenic Vibrio isolated from aquaculture-grown white-leg shrimp (Penaeus vannamei) in Guangdong and Jiangsu, China
    Wang, Zhiwei
    Wang, Hui
    Chen, Duanduan
    Li, Yubao
    AQUACULTURE, 2024, 580