Comparison of Restriction Enzymes for Pulsed-Field Gel Electrophoresis Typing of Moraxella catarrhalis

被引:6
|
作者
Marti, Sara [1 ,2 ]
Puig, Carmen [1 ,2 ]
Domenech, Arnau [1 ,2 ]
Linares, Josefina [1 ,2 ]
Ardanuy, Carmen [1 ,2 ]
机构
[1] Univ Barcelona, Hosp Univ Bellvitge, IDIBELL, Dept Microbiol, Barcelona, Spain
[2] ISCIII, CIBER Enfermedades Resp, Madrid, Spain
关键词
RESPIRATORY-TRACT PATHOGEN; MOLECULAR ASPECTS; DNA RESTRICTION; INFECTION; GENOMES; COPD;
D O I
10.1128/JCM.00823-13
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
NotI, the most prevalent restriction enzyme used for typing Moraxella catarrhalis, failed to digest genomic DNA from respiratory samples. An improved pulsed-field gel electrophoresis (PFGE) methodology determined SpeI as the best choice for typing this bacterial species, with a good restriction of clinical samples and a good clustering correlation with NotI.
引用
收藏
页码:2448 / 2452
页数:5
相关论文
共 50 条
  • [41] Evaluation of pulsed-field gel electrophoresis for typing of Shigella dysenteriae type 1
    Talukder, KA
    Dutta, DK
    Albert, MJ
    JOURNAL OF MEDICAL MICROBIOLOGY, 1999, 48 (08) : 781 - 784
  • [42] Typing of human Campylobacter jejuni isolates in Finland by pulsed-field gel electrophoresis
    Hänninen, ML
    Pajarre, S
    Klossner, ML
    Rautelin, H
    JOURNAL OF CLINICAL MICROBIOLOGY, 1998, 36 (06) : 1787 - 1789
  • [43] Molecular typing of Listeria monocytogenes isolated in Japan by pulsed-field gel electrophoresis
    Nakama, A
    Matsuda, M
    Itoh, T
    Kaneuchi, C
    JOURNAL OF VETERINARY MEDICAL SCIENCE, 1998, 60 (06): : 749 - 752
  • [44] Pulsed-field gel electrophoresis as a method for typing Clostridium difficile in the routine laboratory
    Hyett, AP
    Brazier, JS
    O'Neill, GL
    REVIEWS IN MEDICAL MICROBIOLOGY, 1997, 8 : S63 - S64
  • [45] Improved pulsed-field gel electrophoresis for typing vancomycin-resistant enterococci
    Turabelidze, D
    Kotetishvili, M
    Kreger, A
    Morris, JG
    Sulakvelidze, A
    JOURNAL OF CLINICAL MICROBIOLOGY, 2000, 38 (11) : 4242 - 4245
  • [46] COMPARISON OF PULSED-FIELD GEL-ELECTROPHORESIS WITH ISOENZYME PROFILES AS A TYPING SYSTEM FOR CANDIDA-TROPICALIS
    DOEBBELING, BN
    LEHMANN, PF
    HOLLIS, RJ
    WU, LC
    WIDMER, AF
    VOSS, A
    PFALLER, MA
    CLINICAL INFECTIOUS DISEASES, 1993, 16 (03) : 377 - 383
  • [47] PULSED-FIELD GEL-ELECTROPHORESIS
    HELLER, C
    ANALUSIS, 1993, 21 (03) : M11 - M14
  • [48] PULSED-FIELD GEL-ELECTROPHORESIS
    BARLOW, D
    GENOME, 1989, 31 (01) : 465 - 466
  • [49] Comparison of ribotyping, arbitrarily primed PCR, and pulsed-field gel electrophoresis for molecular typing of Listeria monocytogenes
    Louie, M
    Jayaratne, P
    Luchsinger, I
    Devenish, J
    Yao, J
    Schlech, W
    Simor, A
    JOURNAL OF CLINICAL MICROBIOLOGY, 1996, 34 (01) : 15 - 19
  • [50] Comparison of IS1245 restriction fragment length polymorphism and pulsed-field gel electrophoresis for typing clinical isolates of Mycobacterium avium subsp avium
    Garriga, X
    Cortés, P
    Rodríguez, P
    March, F
    Prats, G
    Coll, P
    INTERNATIONAL JOURNAL OF TUBERCULOSIS AND LUNG DISEASE, 2000, 4 (05) : 463 - 472