The functions and unique features of long intergenic non-coding RNA

被引:1019
|
作者
Ransohoff, Julia D. [1 ]
Wei, Yuning [1 ]
Khavari, Paul A. [1 ,2 ]
机构
[1] Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA
[2] Vet Affairs Palo Alto Healthcare Syst, Palo Alto, CA 94304 USA
基金
美国国家卫生研究院;
关键词
X-CHROMOSOME INACTIVATION; GENOME-WIDE ANALYSIS; EMBRYONIC STEM-CELLS; OPEN READING FRAMES; GENE-EXPRESSION; MESSENGER-RNA; TRANSCRIPTIONAL ACTIVITY; XIST RNA; BINDING PROTEINS; ACTIVE CHROMATIN;
D O I
10.1038/nrm.2017.104
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Long intergenic non-coding RNA (lincRNA) genes have diverse features that distinguish them from mRNA-encoding genes and exercise functions such as remodelling chromatin and genome architecture, RNA stabilization and transcription regulation, including enhancer-associated activity. Some genes currently annotated as encoding lincRNAs include small open reading frames (smORFs) and encode functional peptides and thus may be more properly classified as coding RNAs. lincRNAs may broadly serve to fine-tune the expression of neighbouring genes with remarkable tissue specificity through a diversity of mechanisms, highlighting our rapidly evolving understanding of the non-coding genome.
引用
收藏
页码:143 / 157
页数:15
相关论文
共 50 条
  • [41] Long Non-Coding RNA in Cancer
    Hauptman, Nina
    Glavac, Damjan
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2013, 14 (03) : 4655 - 4669
  • [42] Long non-coding RNA and cancer
    Akiyama, Tetsu
    Nishida, Naohiro
    CANCER SCIENCE, 2018, 109 : 1101 - 1101
  • [43] Long Non-Coding RNA Epigenetics
    Kazimierczyk, Marek
    Wrzesinski, Jan
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (11)
  • [44] Long non-coding RNA and cancer
    Diederichs, S.
    EUROPEAN JOURNAL OF CANCER, 2014, 50 : S13 - S13
  • [45] Long non-coding RNA stability
    Hannah Stower
    Nature Reviews Genetics, 2012, 13 (5) : 298 - 298
  • [46] Evolutionarily conserved long intergenic non-coding RNAs in the eye
    Mustafi, Debarshi
    Kevany, Brian M.
    Bai, Xiaodong
    Maeda, Tadao
    Sears, Jonathan E.
    Khalil, Ahmad M.
    Palczewski, Krzysztof
    HUMAN MOLECULAR GENETICS, 2013, 22 (15) : 2992 - 3002
  • [47] In silico prediction of long intergenic non-coding RNAs in sheep
    Bakhtiarizadeh, Mohammad Reza
    Hosseinpour, Batool
    Arefnezhad, Babak
    Shamabadi, Narges
    Salami, Seyed Alireza
    GENOME, 2016, 59 (04) : 263 - 275
  • [48] RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts
    Geisler, Sarah
    Coller, Jeff
    NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2013, 14 (11) : 699 - 712
  • [49] RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts
    Sarah Geisler
    Jeff Coller
    Nature Reviews Molecular Cell Biology, 2013, 14 : 699 - 712
  • [50] The BRAF activated non-coding RNA: A pivotal long non-coding RNA in human malignancies
    Liu, Xiu-Fen
    Hao, Ji-Long
    Xie, Tian
    Pant, Om Prakash
    Lu, Cheng-Bo
    Lu, Cheng-Wei
    Zhou, Dan-Dan
    CELL PROLIFERATION, 2018, 51 (04)