The functions and unique features of long intergenic non-coding RNA

被引:1019
|
作者
Ransohoff, Julia D. [1 ]
Wei, Yuning [1 ]
Khavari, Paul A. [1 ,2 ]
机构
[1] Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA
[2] Vet Affairs Palo Alto Healthcare Syst, Palo Alto, CA 94304 USA
基金
美国国家卫生研究院;
关键词
X-CHROMOSOME INACTIVATION; GENOME-WIDE ANALYSIS; EMBRYONIC STEM-CELLS; OPEN READING FRAMES; GENE-EXPRESSION; MESSENGER-RNA; TRANSCRIPTIONAL ACTIVITY; XIST RNA; BINDING PROTEINS; ACTIVE CHROMATIN;
D O I
10.1038/nrm.2017.104
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Long intergenic non-coding RNA (lincRNA) genes have diverse features that distinguish them from mRNA-encoding genes and exercise functions such as remodelling chromatin and genome architecture, RNA stabilization and transcription regulation, including enhancer-associated activity. Some genes currently annotated as encoding lincRNAs include small open reading frames (smORFs) and encode functional peptides and thus may be more properly classified as coding RNAs. lincRNAs may broadly serve to fine-tune the expression of neighbouring genes with remarkable tissue specificity through a diversity of mechanisms, highlighting our rapidly evolving understanding of the non-coding genome.
引用
收藏
页码:143 / 157
页数:15
相关论文
共 50 条
  • [21] HOXD-AS1: a novel oncogenic long intergenic non-coding RNA in humans
    Xie, S. C.
    Yang, Y. J.
    Zhang, J. Q.
    Zhou, S.
    Xie, S. W.
    Hua, Y. Y.
    EUROPEAN REVIEW FOR MEDICAL AND PHARMACOLOGICAL SCIENCES, 2019, 23 (07) : 2898 - 2907
  • [22] Elucidating the role of long intergenic non-coding RNA 339 in human endometrium and endometriosis
    Holdsworth-Carson, Sarah J.
    Churchill, Molly
    Donoghue, Jacqueline F.
    Mortlock, Sally
    Fung, Jenny N.
    Sloggett, Clare
    Chung, Jessica
    Cann, Leonie
    Teh, Wan Tinn
    Campbell, Katie-Rose
    Luwor, Rodney
    Healey, Martin
    Montgomery, Grant
    Girling, Jane E.
    Rogers, Peter A. W.
    MOLECULAR HUMAN REPRODUCTION, 2021, 27 (03)
  • [23] Long intergenic non-coding RNA 271 is predictive of a poorer prognosis of papillary thyroid cancer
    Ben Ma
    Tian Liao
    Duo Wen
    Chuanpeng Dong
    Li Zhou
    Shuwen Yang
    Yu Wang
    Qinghai Ji
    Scientific Reports, 6
  • [24] Large-scale study of long non-coding RNA functions based on structure and expression features
    Zhao Yi
    Wang Jian
    Chen XiaoWei
    Luo HaiTao
    Zhao YunJie
    Xiao Yi
    Chen RenSheng
    SCIENCE CHINA-LIFE SCIENCES, 2013, 56 (10) : 953 - 959
  • [25] Identification of long intergenic non-coding RNA modulated by Candidatus Liberibacter spp. in potato
    Kavuri, N. R.
    Bedre, R.
    Ramasamy, M.
    Irigoyen, S.
    Nelson, A.
    Mandadi, K. K.
    PHYTOPATHOLOGY, 2023, 113 (09)
  • [26] Long intergenic non-coding RNA 271 is predictive of a poorer prognosis of papillary thyroid cancer
    Ma, Ben
    Liao, Tian
    Wen, Duo
    Dong, Chuanpeng
    Zhou, Li
    Yang, Shuwen
    Wang, Yu
    Ji, Qinghai
    SCIENTIFIC REPORTS, 2016, 6
  • [27] Long intergenic non-coding RNA TUG1 is overexpressed in urothelial carcinoma of the bladder
    Han, Yonghua
    Liu, Yuchen
    Gui, Yaoting
    Cai, Zhiming
    JOURNAL OF SURGICAL ONCOLOGY, 2013, 107 (05) : 555 - 559
  • [28] Large-scale study of long non-coding RNA functions based on structure and expression features
    Yi Zhao
    Jian Wang
    XiaoWei Chen
    HaiTao Luo
    YunJie Zhao
    Yi Xiao
    RenSheng Chen
    Science China Life Sciences, 2013, 56 : 953 - 959
  • [29] Novel long intergenic non-coding RNA-AC064834.1-Misregulation in gastric cancer
    Abdi, Esmat
    Latifi-Navid, Saeid
    Zahri, Saber
    Kholghi-Oskooei, Vahid
    Yazdanbod, Abbas
    GENE REPORTS, 2021, 24
  • [30] Large-scale study of long non-coding RNA functions based on structure and expression features
    ZHAO Yi
    WANG Jian
    CHEN XiaoWei
    LUO HaiTao
    ZHAO YunJie
    XIAO Yi
    CHEN RenSheng
    Science China(Life Sciences), 2013, 56 (10) : 953 - 959