Activity-based fingerprinting of proteases

被引:27
|
作者
Srinivasan, R
Huang, X
Ng, SL
Yao, SQ
机构
[1] Natl Univ Singapore, Dept Chem, Singapore 117543, Singapore
[2] Natl Univ Singapore, Dept Biol Sci, Singapore 117543, Singapore
关键词
activity-based profiling; enzymes; microarrays; proteases; proteomics;
D O I
10.1002/cbic.200500340
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Not inhibited. We have successfully synthesized and tested a panel of activity-based small-molecule probes that target different classes of proteases on the basis of their enzymatic activities and substrate specificities rather than their inhibition. We have demonstrated that these probes are useful for generating unique substrate fingerprint profiles of proteases in gel-based proteomic experiments. Preliminary results indicate that they might be equally amenable for microarray-based enzyme profiling experiments. © 2006 Wiley-VCH Verlag GmbH & Co. KGaA.
引用
收藏
页码:32 / 36
页数:5
相关论文
共 50 条
  • [41] Phosphinate Esters as Novel Warheads for Quenched Activity-Based Probes Targeting Serine Proteases
    Kahler, Jan Pascal
    Ji, Shanping
    Speelman-Rooms, Femke
    Vanhoutte, Roeland
    Verhelst, Steven H. L.
    ACS CHEMICAL BIOLOGY, 2024, 19 (07) : 1409 - 1415
  • [42] Emerging challenges in the design of selective substrates, inhibitors and activity-based probes for indistinguishable proteases
    Kasperkiewicz, Paulina
    Poreba, Marcin
    Groborz, Katarzyna
    Drag, Marcin
    FEBS JOURNAL, 2017, 284 (10) : 1518 - 1539
  • [43] Novel broad-spectrum activity-based probes to profile malarial cysteine proteases
    Tan, Michele S. Y.
    Davison, Dara
    Sanchez, Mateo I.
    Anderson, Bethany M.
    Howell, Stephen
    Snijders, Ambrosius
    Edgington-Mitchell, Laura E.
    Deu, Edgar
    PLOS ONE, 2020, 15 (01):
  • [44] Tagged Benzoxazin-4-Ones as Novel Activity-Based Probes for Serine Proteases
    Yang, Jian
    Mendowicz, Rafal J.
    Verhelst, Steven H. L.
    CHEMBIOCHEM, 2021, 22 (09) : 1578 - 1581
  • [45] Functional imaging of proteases: recent advances in the design and application of substrate-based and activity-based probes
    Edgington, Laura E.
    Verdoes, Martijn
    Bogyo, Matthew
    CURRENT OPINION IN CHEMICAL BIOLOGY, 2011, 15 (06) : 798 - 805
  • [46] Mixed alkyl aryl phosphonate esters as quenched fluorescent activity-based probes for serine proteases
    Serim, Sevnur
    Baer, Philipp
    Verhelst, Steven H. L.
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2015, 13 (08) : 2293 - 2299
  • [47] Activity-based proteomics
    Cravatt, Benjamin F.
    ACTA PHARMACOLOGICA SINICA, 2006, 27 : 448 - 448
  • [48] Activity-Based Therapies
    Dromerick A.W.
    Lum P.S.
    Hidler J.
    NeuroRX, 2006, 3 (4): : 428 - 438
  • [49] Activity-based computing
    Davies, Nigel
    Siewiorek, Daniel P.
    Sukthankar, Rahul
    IEEE PERVASIVE COMPUTING, 2008, 7 (02) : 20 - 21
  • [50] Activity-based proteomics
    Cravatt, Benjamin F.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2006, 231