Substructure determination using phase-retrieval techniques

被引:12
|
作者
Skubak, Pavol [1 ]
机构
[1] Leiden Univ, Biophys Struct Chem, POB 9502, NL-2300 RA Leiden, Netherlands
关键词
substructure determination; single-wavelength anomalous scattering; phase retrieval; charge flipping; relaxed averaged alternating reflections; PRASA; CHARGE-FLIPPING ALGORITHM; ANOMALOUS SIGNAL; IMPLEMENTATION; DESIGN; MODEL;
D O I
10.1107/S2059798317014462
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Thus far, the application of phase-retrieval methods in crystallography has mainly been aimed at variants of charge flipping or structure-factor flipping. In this work, the relaxed averaged alternating reflections (RAAR) algorithm is applied to determine anomalously scattering substructures from single-wavelength anomalous diffraction (SAD) data of macromolecules. The algorithm has been implemented in a new program, PRASA, and has been shown to significantly outperform charge flipping in determining anomalously scattering substructures on a test sample of 169 SAD data sets with resolutions up to 3.88 angstrom.
引用
收藏
页码:117 / 124
页数:8
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