Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270

被引:21
|
作者
Hernandez-Salmeron, Julie E. [1 ]
Hernandez-Leon, Rocio [1 ]
Del Carmen Orozco-Mosqueda, Ma. [1 ]
Valencia-Cantero, Eduardo [1 ]
Moreno-Hagelsieb, Gabriel [2 ]
Santoyo, Gustavo [1 ]
机构
[1] Univ Michoacana, Inst Invest Quim Biol, Morelia, Michoacan, Mexico
[2] Wilfrid Laurier Univ, Dept Biol, Waterloo, ON N2L 3C5, Canada
来源
关键词
Pseudomonas fluorescens; Biocontrol; PGPR; BACTERIA; MECHANISMS; SYSTEM;
D O I
10.1186/s40793-015-0123-9
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Pseudomonas fluorescens strain UM270 was isolated form the rhizosphere of wild Medicago spp. A previous work has shown that this pseudomonad isolate was able to produce diverse diffusible and volatile compounds involved in plant protection and growth promotion. Here, we present the draft genome sequence of the rhizobacterium P. fluorescens strain UM270. The sequence covers 6,047,974 bp of a single chromosome, with 62.66 % G + C content and no plasmids. Genome annotations predicted 5,509 genes, 5,396 coding genes, 59 RNA genes and 110 pseudogenes. Genome sequence analysis revealed the presence of genes involved in biological control and plant-growth promoting activities. We anticipate that the P. fluorescens strain UM270 genome will contribute insights about bacterial plant protection and beneficial properties through genomic comparisons among fluorescent pseudomonads.
引用
收藏
页数:7
相关论文
共 50 条
  • [41] Draft Genome Sequence of Bacillus velezensis Lzh-a42, a Plant Growth-Promoting Rhizobacterium Isolated from Tomato Rhizosphere
    Li, Zhenghua
    Chen, Mei
    Ran, Kun
    Wang, Jihua
    Zeng, Qiangcheng
    Song, Feng
    GENOME ANNOUNCEMENTS, 2018, 6 (12)
  • [42] Draft Genome Sequence of Pseudomonas sp. Strain CMAA 1215, a Plant Growth-Promoting Bacterium Isolated from a Brazilian Mangrove
    Vasconcellos, Rafael L. F.
    Mendes, Rodrigo
    Taketani, Rodrigo G.
    Zucchi, Tiago D.
    Melo, Itamar Soares
    GENOME ANNOUNCEMENTS, 2013, 1 (06)
  • [43] Characterization of a Versatile Plant Growth-Promoting Rhizobacterium Pseudomonas mediterranea Strain S58
    Gu, Yilin
    Wang, Jing
    Xia, Zhenyuan
    Wei, Hai-Lei
    MICROORGANISMS, 2020, 8 (03)
  • [44] Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113
    Redondo-Nieto, Miguel
    Barret, Matthieu
    Morrisey, John P.
    Germaine, Kieran
    Martinez-Granero, Francisco
    Barahona, Emma
    Navazo, Ana
    Sanchez-Contreras, Maria
    Moynihan, Jennifer A.
    Giddens, Stephen R.
    Coppoolse, Eric R.
    Muriel, Candela
    Stiekema, Willem J.
    Rainey, Paul B.
    Dowling, David
    O'Gara, Fergal
    Martin, Marta
    Rivilla, Rafael
    JOURNAL OF BACTERIOLOGY, 2012, 194 (05) : 1273 - 1274
  • [45] Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
    Ma, Jinjin
    Wang, Chengqiang
    Wang, Haide
    Liu, Kai
    Zhang, Tongrui
    Yao, Liangtong
    Zhao, Zhou
    Du, Binghai
    Ding, Yanqin
    BIOMED RESEARCH INTERNATIONAL, 2018, 2018
  • [46] Complete Genome Sequence of Bacillus velezensis DSYZ, a Plant Growth-Promoting Rhizobacterium with Antifungal Properties
    Zhao, Jian
    Liu, Hu
    Liu, Kai
    Li, Hao
    Peng, Yulong
    Liu, Jing
    Han, Xiaobin
    Liu, Xin
    Yao, Liangtong
    Hou, Qihui
    Wang, Chengqiang
    Ding, Yanqin
    Du, Binghai
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (08):
  • [47] Genome Sequence of the Banana Plant Growth-Promoting Rhizobacterium Bacillus amyloliquefaciens BS006
    Gamez, Rocio M.
    Rodriguez, Fernando
    Bernal, Johan F.
    Agarwala, Richa
    Landsman, David
    Marino-Ramirez, Leonardo
    GENOME ANNOUNCEMENTS, 2015, 3 (06)
  • [48] Draft Genome Sequence of Brevibacillus brevis DZQ7, a Plant Growth-Promoting Rhizobacterium with Broad-Spectrum Antimicrobial Activity
    Hou, Qihui
    Wang, Chengqiang
    Hou, Xiaoyang
    Xia, Zhilin
    Ye, Jiangping
    Liu, Kai
    Liu, Hu
    Wang, Jun
    Guo, Haimeng
    Yu, Xiaoning
    Yang, Yanan
    Du, Binghai
    Ding, Yanqin
    GENOME ANNOUNCEMENTS, 2015, 3 (04)
  • [49] Draft Genome Sequence of the Plant Growth-Promoting Streptomyces sp. Strain 6-11-2
    Ztouti, Ayman
    Saito, Natsumi
    Sasaki, Junna
    Yamaguchi, Takashi
    Araki, Nobuo
    Oshiki, Mamoru
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (47):
  • [50] Draft Genome Sequence of Acinetobacter calcoaceticus Strain P23, a Plant Growth-Promoting Bacterium of Duckweed
    Sugawara, Masayuki
    Hosoyama, Akira
    Yamazoe, Atsushi
    Morikawa, Masaaki
    GENOME ANNOUNCEMENTS, 2015, 3 (01)