Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270

被引:21
|
作者
Hernandez-Salmeron, Julie E. [1 ]
Hernandez-Leon, Rocio [1 ]
Del Carmen Orozco-Mosqueda, Ma. [1 ]
Valencia-Cantero, Eduardo [1 ]
Moreno-Hagelsieb, Gabriel [2 ]
Santoyo, Gustavo [1 ]
机构
[1] Univ Michoacana, Inst Invest Quim Biol, Morelia, Michoacan, Mexico
[2] Wilfrid Laurier Univ, Dept Biol, Waterloo, ON N2L 3C5, Canada
来源
关键词
Pseudomonas fluorescens; Biocontrol; PGPR; BACTERIA; MECHANISMS; SYSTEM;
D O I
10.1186/s40793-015-0123-9
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Pseudomonas fluorescens strain UM270 was isolated form the rhizosphere of wild Medicago spp. A previous work has shown that this pseudomonad isolate was able to produce diverse diffusible and volatile compounds involved in plant protection and growth promotion. Here, we present the draft genome sequence of the rhizobacterium P. fluorescens strain UM270. The sequence covers 6,047,974 bp of a single chromosome, with 62.66 % G + C content and no plasmids. Genome annotations predicted 5,509 genes, 5,396 coding genes, 59 RNA genes and 110 pseudogenes. Genome sequence analysis revealed the presence of genes involved in biological control and plant-growth promoting activities. We anticipate that the P. fluorescens strain UM270 genome will contribute insights about bacterial plant protection and beneficial properties through genomic comparisons among fluorescent pseudomonads.
引用
收藏
页数:7
相关论文
共 50 条
  • [31] Proteomics of a plant growth-promoting rhizobacterium, Pseudomonas fluorescens MSP-393, subjected to salt shock
    Paul, Diby
    Dineshkumar, N.
    Nair, Sudha
    WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2006, 22 (04): : 369 - 374
  • [32] Proteomics of a plant growth-promoting rhizobacterium, Pseudomonas fluorescens MSP-393, subjected to salt shock
    Diby Paul
    N. Dineshkumar
    Sudha Nair
    World Journal of Microbiology and Biotechnology, 2006, 22 : 369 - 374
  • [33] Complete Genome Sequence of Bacillus pumilus Strain WP8, an Efficient Plant Growth-Promoting Rhizobacterium
    Kang, Yijun
    Shen, Min
    Wang, Huanli
    Zhao, Qingxin
    GENOME ANNOUNCEMENTS, 2015, 3 (01)
  • [34] Complete Genome Sequence of Bacillus methylotrophicus Strain B25, a Potential Plant Growth-Promoting Rhizobacterium
    Gerbore, Jonathan
    Brutel, Aline
    Lemainque, Arnaud
    Mairey, Barbara
    Medigue, Claudine
    Vallenet, David
    Lefort, Francois
    Grizard, Damien
    GENOME ANNOUNCEMENTS, 2016, 4 (02)
  • [35] Complete Genome Sequence of the Rhizobacterium Pseudomonas trivialis Strain IHBB745 with Multiple Plant Growth-Promoting Activities and Tolerance to Desiccation and Alkalinity
    Gulati, Arvind
    Swarnkar, Mohit Kumar
    Vyas, Pratibha
    Rahi, Praveen
    Thakur, Rishu
    Thakur, Namika
    Singh, Anil Kumar
    GENOME ANNOUNCEMENTS, 2015, 3 (05)
  • [36] Draft genome sequence of Bacillus atrophaeus TL401, a biocontrol bacterium with plant growth-promoting properties
    Peng, Wanrong
    Guo, Xueying
    Shi, Hongli
    Yang, Xingyong
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2024, 13 (07):
  • [37] Genome Sequence of the Plant Growth-Promoting Rhizobacterium Pantoea agglomerans C1
    Luziatelli, Francesca
    Ficca, Anna Grazia
    Melini, Francesca
    Ruzzi, Maurizio
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2019, 8 (44):
  • [38] Draft Genome Sequence of Plant Growth-Promoting Rhizobacterium Burkholderia sp. Strain USMB20, Isolated from Nodules of Mucuna bracteata
    Ab Aziz, Nurohaida
    Shaffie, Salwani
    Rahman, Ahmad Yamin Abdul
    Hokchai, Yam
    Najimudin, Nazalan
    Ghazali, Amir Hamzah Ahmad
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2021, 10 (11):
  • [39] Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China
    Guo, Yanbin
    Jiao, Ziwei
    Li, Lei
    Wu, Di
    Crowley, David E.
    Wang, Yongjun
    Wu, Wenliang
    JOURNAL OF BACTERIOLOGY, 2012, 194 (23) : 6646 - 6647
  • [40] Draft Genome Sequence of Bacillus methylotrophicus FKM10, a Plant Growth-Promoting Rhizobacterium Isolated from Apple Rhizosphere
    Wang, Chengqiang
    Hu, Xiuna
    Liu, Kai
    Hou, Qihui
    Yang, Qianqian
    Ding, Yanqin
    Du, Binghai
    GENOME ANNOUNCEMENTS, 2016, 4 (01)