A simple alkali lysis method for Plasmodium falciparum DNA extraction from filter paper blood samples

被引:3
|
作者
Xiang, Zheng [1 ]
Li, Danlin [1 ]
Wang, Siqi [1 ]
Shen, Ting [1 ]
He, Wen [1 ]
Li, Mier [1 ]
Zeng, Weilin [1 ]
Chen, Xi [1 ]
Wu, Yanrui [3 ]
Cui, Liwang [2 ]
Yang, Zhaoqing [1 ]
机构
[1] Kunming Med Univ, Fac Basic Med Sci, Dept Pathogen Biol & Immunol, Kunming 650500, Yunnan, Peoples R China
[2] Univ S Florida, Dept Internal Med, Tampa, FL 33612 USA
[3] Kunming Med Univ, Dept Cell Biol & Genet, Kunming 650500, Yunnan, Peoples R China
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
DNA extraction; Alkali lysis; Plasmodium falciparum; POLYMERASE-CHAIN-REACTION; REAL-TIME-PCR; MALARIA DETECTION; GENOMIC DNA; DRIED BLOOD; SENSITIVITY; DIAGNOSIS; SPOTS;
D O I
10.1016/j.molbiopara.2023.111557
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A fast, simple, easy, efficient, and inexpensive method for DNA extraction from malaria parasites collected on filter paper would be very useful for molecular surveillance. The quality and quantity of DNA are critical to molecular diagnosis and analysis. Here, we developed a simple alkali lysis method for DNA extraction from blood samples on filter paper. The results showed that 10-50 mM NaOH and deionized water all effectively isolated parasite DNA at higher parasitemia, as witnessed by successful PCR amplification, while at a parasitemia of 0.01%, the 10 mM NaOH lysis condition generated the best results. Furthermore, DNA extracted by this method was successfully used to amplify a fragment of > 2000 bp. This method successfully extracted DNA from 1 mu l of blood at a parasitemia as low as 0.0001% (equivalent to 5 parasites /mu l). The DNA isolated by the 10 mM NaOH lysis method was stable to yield PCR products after storage at 4 degrees C or -20 degrees C for 12 months. These results indicate that this alkali lysis method is simple, effective, sensitive, and inexpensive for isolating stable Plasmo-dium DNA from dried blood spots on filter paper.
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页数:6
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