Enriching adenosine by thymine-rich DNA oligomers

被引:1
|
作者
Liu, Mingchun [1 ]
Chen, Huaiqing [2 ]
Huang, Yuhan [1 ]
Liu, Jian [1 ]
Chen, Qianfeng [1 ]
Zuo, Hua [1 ]
Fang, Liang [3 ,4 ]
Mao, Chengde [1 ,5 ]
机构
[1] Southwest Univ, Coll Pharmaceut Sci, Key Lab Luminescence Anal & Mol Sensing, Minist Educ, Chongqing 400715, Peoples R China
[2] Southwest Univ, Biol Sci Res Ctr, State Key Lab Silkworm Genome Biol, Chongqing 400715, Peoples R China
[3] Ninth Chongqing Peoples Hosp, Dept Oncol, Chongqing 400700, Peoples R China
[4] Second Affiliated Hosp Chongqing Med Univ, Dept Hematol, Chongqing 400010, Peoples R China
[5] Purdue Univ, Dept Chem, W Lafayette, IN 47907 USA
基金
美国国家科学基金会;
关键词
ENRICHMENT; NUCLEOSIDES; SEPARATION; RECEPTORS; CAPTURE; SILICA; ACID;
D O I
10.1039/d3an00297g
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Adenosine levels are important in various physiological and pathological activities, but detecting them is difficult because of interference from a complex matrix. This study designed a series of DNA oligomers rich in thymine to enrich adenosine. Their binding affinity (K-d range: 1.25-5.0 mM) to adenosine varied based on the DNA secondary structures, with a clamped hairpin structure showing the highest binding affinity. Compared to other designs, this clamped DNA hairpin underwent the least conformational change during adenosine binding. These DNAs also suppressed the precipitation of supersaturated adenine. Taken together, these results suggest that thymine-rich DNAs could be used to enrich and separate adenosine.
引用
收藏
页码:1858 / 1866
页数:9
相关论文
共 50 条
  • [31] Glycogen Synthase Kinase-3 regulates IGFBP-1 gene transcription through the Thymine-rich Insulin Response Element (vol 5, 15, 2004)
    Finlay, David
    Patel, Satish
    Dickson, Lorna M.
    Shpiro, Natalia
    Marquez, Rodolfo
    Rhodes, Chris J.
    Sutherland, Calum
    BMC MOLECULAR AND CELL BIOLOGY, 2024, 25 (01)
  • [32] Femtosecond Two-Dimensional Infrared Spectroscopy of Adenine-Thymine Base Pairs in DNA Oligomers
    Yang, Ming
    Szyc, Lukasz
    Elsaesser, Thomas
    JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (05): : 1262 - 1267
  • [33] Adenosine receptors containing oligomers: relevance for adenosine function
    Ciruela, Francisco
    PURINERGIC SIGNALLING, 2010, 6 : 18 - 18
  • [34] Thymine DNA glycosylase
    Hardeland, U
    Bentele, M
    Lettieri, T
    Steinacher, R
    Jiricny, J
    Schär, P
    PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 68: BASE EXCISION REPAIR, 2001, 68 : 235 - 253
  • [35] THE RAMAN-SPECTRA OF LEFT-HANDED DNA OLIGOMERS INCORPORATING ADENINE-THYMINE BASE-PAIRS
    BENEVIDES, JM
    WANG, AHJ
    VANDERMAREL, GA
    VANBOOM, JH
    RICH, A
    THOMAS, GJ
    NUCLEIC ACIDS RESEARCH, 1984, 12 (14) : 5913 - 5925
  • [37] KINETICS OF THYMINE PHOTODIMERIZATION IN DNA
    WULFF, DL
    BIOPHYSICAL JOURNAL, 1963, 3 (05) : 355 - &
  • [38] SENSITIZED PHOTODIMERIZATION OF THYMINE IN DNA
    LAMOLA, AA
    YAMANE, T
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1967, 58 (02) : 443 - &
  • [39] THYMINE DIMERS BEND DNA
    HUSAIN, I
    GRIFFITH, J
    SANCAR, A
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (08) : 2558 - 2562
  • [40] Accumulation of thymine dimers in DNA
    Finch, AS
    Ito, T
    Rokita, SE
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2005, 230 : U517 - U517