The complete mitochondrial genome of the tropical sea urchin Tripneustes gratilla (Linnaeus, 1758) with two spine colors

被引:1
|
作者
Wang, Heng [1 ,2 ]
Zhang, Xiying [1 ]
Yao, Jiahui [1 ]
Gang, Debao [1 ]
Zeng, Yuting [2 ]
Mao, Mingguang [2 ]
Jiang, Jielan [2 ,3 ]
机构
[1] Dalian Ocean Univ, Key Lab Mariculture & Stock Enhancement North Chin, Minist Agr & Rural Affairs, Dalian, Peoples R China
[2] Hainan Trop Ocean Univ, Yazhou Bay Innovat Inst, Sanya, Peoples R China
[3] Hainan Trop Ocean Univ, Yazhou Bay Innovat Inst, Sanya 572022, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 01期
关键词
Mitochondrial genome; sea urchin; Tripneustes gratilla; spine color variation; ECHINOIDEA;
D O I
10.1080/23802359.2023.2298091
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genomes of two spine-color individuals, red and white, of the tropical sea urchin species Tripneustes gratilla (Linnaeus, 1758) were sequenced on Illumina system platform. The red-spined species had a genome size of 15,774 bp, while the white-spined species had a genome size of 15,723 bp. Both genomes contained 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The GC composition in both species was above 40%. In order to investigate the phylogenetic relationships of two different spine-color individuals, a comprehensive analysis was conducted using eight complete mitochondrial genomic sequences of the genus Tripneustes on the software MEGA X. It was observed that the two spine color types of T. gratilla species showed a high similarity of 98.91%. However, different color-spined species of T. gratilla were found in separate branches of the phylogenetic tree of the same sea urchin species.
引用
收藏
页码:15 / 19
页数:5
相关论文
共 50 条
  • [41] The complete mitochondrial genome sequence of the sea urchin Glyptocidaris crenularis and its phylogenetic analysis
    Ding, Jun
    Liu, Xiaohuan
    Chang, Yaqing
    Zhang, Weijie
    CONSERVATION GENETICS RESOURCES, 2017, 9 (01) : 63 - 66
  • [42] Complete mitochondrial genome of the Arctic green sea urchin Strongylocentrotus droebachiensis (Strongylocentrotidae, Echinoidea)
    Rhee, Jae-Sung
    Ki, Jang-Seu
    Hwang, Dae-Sik
    Park, Hyun
    Ahn, In-Young
    Lee, Jae-Seong
    MITOCHONDRIAL DNA, 2012, 23 (05): : 369 - 370
  • [43] The complete mitochondrial genome sequence of the sea urchin Glyptocidaris crenularis and its phylogenetic analysis
    Jun Ding
    Xiaohuan Liu
    Yaqing Chang
    Weijie Zhang
    Conservation Genetics Resources, 2017, 9 : 63 - 66
  • [44] Determination and phylogenetic analysis of the complete mitochondrial genome of Bubalus bubalis Linnaeus, 1758 breed Murrah (Artiodactyla: Bovidae)
    Lin, Qian
    Li, Meng-Wei
    Wang, Yan-Zhou
    Qiu, Hua-Jiao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 432 - 433
  • [45] The complete mitochondrial genome of rubble crab Daldorfia horrida (Linnaeus, 1758) using next-generation sequencing
    Yang, Mingqiu
    He, Yugui
    Liu, Hongtao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3320 - 3321
  • [46] Complete mitochondrial genome of the highly fecund Bombyx mori linnaeus, 1758 (Lepidoptera: Bombycidae) strain Jam 146
    Kim, Seong-Wan
    Park, Jeong Sun
    Kim, Min Jee
    Kim, Kee-Young
    Kim, Seong-Ryul
    Kim, Iksoo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (08): : 2278 - 2280
  • [47] Complete mitochondrial genome sequencing of Lutra lutra (Linnaeus, 1758) (Carnivora: Mustelidae) and its phylogenetic status in Mustelidae
    Kim, Han-Na
    Jo, Yeong-Seok
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2066 - 2068
  • [48] Ulva lactuca biofilter from a land-based integrated multi trophic aquaculture (IMTA) system as a sole food source for the tropical sea urchin Tripneustes gratilla elatensis
    Shpigel, M.
    Shauli, L.
    Odintsov, V
    Ashkenazi, N.
    Ben-Ezra, D.
    AQUACULTURE, 2018, 496 : 221 - 231
  • [49] The complete mitochondrial genome of the short snouted seahorse Hippocampus hippocampus Linnaeus 1758 (Syngnathiformes: Syngnathidae) and its phylogenetic implications
    Meng Chen
    Lingyan Zhu
    Jianzhen Chen
    Guangji Zhang
    Rubin Cheng
    Yuqing Ge
    Conservation Genetics Resources, 2018, 10 : 783 - 787
  • [50] The complete mitochondrial genome of the short snouted seahorse Hippocampus hippocampus Linnaeus 1758 (Syngnathiformes: Syngnathidae) and its phylogenetic implications
    Chen, Meng
    Zhu, Lingyan
    Chen, Jianzhen
    Zhang, Guangji
    Cheng, Rubin
    Ge, Yuqing
    CONSERVATION GENETICS RESOURCES, 2018, 10 (04) : 783 - 787