The complete mitochondrial genome of the tropical sea urchin Tripneustes gratilla (Linnaeus, 1758) with two spine colors

被引:1
|
作者
Wang, Heng [1 ,2 ]
Zhang, Xiying [1 ]
Yao, Jiahui [1 ]
Gang, Debao [1 ]
Zeng, Yuting [2 ]
Mao, Mingguang [2 ]
Jiang, Jielan [2 ,3 ]
机构
[1] Dalian Ocean Univ, Key Lab Mariculture & Stock Enhancement North Chin, Minist Agr & Rural Affairs, Dalian, Peoples R China
[2] Hainan Trop Ocean Univ, Yazhou Bay Innovat Inst, Sanya, Peoples R China
[3] Hainan Trop Ocean Univ, Yazhou Bay Innovat Inst, Sanya 572022, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 01期
关键词
Mitochondrial genome; sea urchin; Tripneustes gratilla; spine color variation; ECHINOIDEA;
D O I
10.1080/23802359.2023.2298091
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genomes of two spine-color individuals, red and white, of the tropical sea urchin species Tripneustes gratilla (Linnaeus, 1758) were sequenced on Illumina system platform. The red-spined species had a genome size of 15,774 bp, while the white-spined species had a genome size of 15,723 bp. Both genomes contained 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The GC composition in both species was above 40%. In order to investigate the phylogenetic relationships of two different spine-color individuals, a comprehensive analysis was conducted using eight complete mitochondrial genomic sequences of the genus Tripneustes on the software MEGA X. It was observed that the two spine color types of T. gratilla species showed a high similarity of 98.91%. However, different color-spined species of T. gratilla were found in separate branches of the phylogenetic tree of the same sea urchin species.
引用
收藏
页码:15 / 19
页数:5
相关论文
共 50 条
  • [31] The Two Sides of the Mediterranean: Population Genomics of the Black Sea Urchin Arbacia lixula (Linnaeus, 1758) in a Warming Sea
    Carreras, Carlos
    Ordonez, Victor
    Garcia-Cisneros, Alex
    Wangensteen, Owen S.
    Palacin, Creu
    Pascual, Marta
    Turon, Xavier
    FRONTIERS IN MARINE SCIENCE, 2021, 8
  • [32] Characterization of complete mitochondrial genome of seven-eleven crab Carpilius maculatus (Linnaeus, 1758)
    Liu, Hongtao
    Yang, Mingqiu
    He, Yugui
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3693 - 3694
  • [33] The Complete Mitochondrial Genome of the Anser cygnoides Linnaeus, 1758 Breed Daozhou and Its Phylogenetic Analyses
    Lin, Qian
    Jiang, Gui-Tao
    Dai, Qiu-Zhong
    RUSSIAN JOURNAL OF GENETICS, 2018, 54 (12) : 1493 - 1497
  • [34] The complete mitochondrial genome of the Anas platyrhynchos Linnaeus, 1758 breed Longshengcui and its phylogenetic analyses
    Zhang, Jing-Meng
    Wang, Xin
    Wang, Qing-Xi
    Liao, Li-Ping
    Chen, Feng-Ming
    Wang, Yan-Zhou
    Lin, Qian
    Liu, Chun-Jie
    Bin, Shi-Yu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (08): : 836 - 840
  • [35] The Complete Mitochondrial Genome of the Anser cygnoides Linnaeus, 1758 Breed Daozhou and Its Phylogenetic Analyses
    Gui-Tao Qian Lin
    Qiu-Zhong Jiang
    Russian Journal of Genetics, 2018, 54 : 1493 - 1497
  • [36] The complete mitochondrial genome of a tropical sea cucumber, Holothuria leucospilota
    Cheng, Chuhang
    Yu, Zonghe
    Ren, Chunhua
    Jiang, Xiao
    Zhang, Xin
    Wu, Xiaofen
    Huang, Wen
    Hu, Chaoqun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3118 - 3119
  • [37] Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
    Chen, Xiaoying
    Sun, Yuping
    Zhao, Hongxia
    Hu, Junru
    Chen, Bing
    Li, Huo
    Huang, Wen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2788 - 2790
  • [38] Complete mitochondrial genome of Chilean sea urchin: Loxechinus albus (Camarodonta, Parechinidae)
    Jung, Gila
    Lee, Youn-Ho
    MITOCHONDRIAL DNA, 2015, 26 (06): : 883 - 884
  • [39] Assessing the reproductive potential and development of the tropical short-spined white sea urchin, Salmacis sphaeroides (Linnaeus, 1758)
    Ying, Lynette S. M.
    Tay, Teresa S.
    Teo, Serena L-M.
    Neo, M. L.
    INVERTEBRATE REPRODUCTION & DEVELOPMENT, 2024, 68 (04) : 225 - 234
  • [40] Complete sequence of the mitochondrial DNA in the sea urchin Arbacia lixula: Conserved features of the echinoid mitochondrial genome
    DeGiorgi, C
    Martiradonna, A
    Lanave, C
    Saccone, C
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 1996, 5 (02) : 323 - 332