Ideonella margarita sp. nov., Ideonella lacteola sp. nov., Pseudaquabacterium inlustre sp. nov. and Pseudaquabacterium rugosum sp. nov., isolated from streams in China and reexamining the taxonomic status of all the genera within the

被引:0
|
作者
Lu, Huibin [1 ]
Chen, Li [1 ]
机构
[1] Yunnan Normal Univ, Fac Geog, Yunnan Key Lab Plateau Geog Proc & Environm Change, Kunming 650500, Peoples R China
关键词
Aquabacterium; Ideonella; streams; FRESH-WATER; SEQUENCES; QUALITY;
D O I
10.1099/ijsem.0.006495
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Four Gram- stain- negative, aerobic, rod- shaped and motile strains (LYT19WT, T , DXS22WT, T , DXS29WT T and BYS139WT) T ) were isolated from streams in China. All four strains showed highest 16S rRNA gene sequence similarities to the species of genus Ideonella. . The calculated average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values among strains LYT19WT, T , DXS22WT, T , DXS29WT, T , BYS139WT T and other closely related strains were less than 79.5, 22.5 and 74.0%, respectively, indicating that each of the four strains should represent an independent novel species. The further reconstructed phylogenomic tree showed that strains LYT19WT T and DXS29WT T clustered closely with Ideonella strains, but strains DXS22WT T and BYS139WT T formed an independent clade with Aquabacterium terrae and Aquabacterium pictum. . Comparing with other Aqua- bacterium species, A. terrae and A. pictum harboured distinct physiological and genetic characteristics, so it was reasonable to propose a novel genus Pseudaquabacterium to accommodate A. terrae, , A. pictum, , DXS22WT T and BYS139WT. T . The major fatty acids of the four strains contained C 16:0 , summed feature 3 ( C 16: 1 omega 6 c and/or C 16:1 omega 7 c ) and summed feature 8 ( C 18: 1 omega 6 c and/ or C 18: 1 omega 7 c ). The predominant polar lipids were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol and one unidentified aminophospholipid. Combining above descriptions, strains LYT19WT T and DXS29WT T should represent two novel species of the genus Ideonella, , for which the names Ideonella margarita sp. nov. (type strain LYT19WT=GDMCC T =GDMCC 1.3205T=KCTC T =KCTC 92545T) T ) and Ideonella lacteola sp. nov. (type strain DXS29WT=GDMCC T =GDMCC 1.3207T=KCTC T =KCTC 92547T) T ) are proposed, respectively. Strains DXS22WT T and BYS139WT T should represent two novel species of the new genus Pseudaquabacterium, , for which the names Pseudaquabacterium inlustre sp. nov. (type strain DXS22WT=GDMCC T =GDMCC 1.3206T=KCTC T =KCTC 92546T) T ) and Pseudaquabacterium rugosum sp. nov. (type strain BYS139WT=GDMCC T =GDMCC 1.3208T=KCTC T =KCTC 92548T) T ) are proposed, respectively.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Ideonella alba sp. nov. and Ideonella aquatica sp. nov. isolated from an aquaculture farm
    Du, Juan
    Liu, Yang
    Pei, Tao
    Zhu, Honghui
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (10)
  • [2] Undibacterium baiyunense sp. nov., Undibacterium curvum sp. nov., Undibacterium fentianense sp. nov., Undibacterium flavidum sp. nov., Undibacterium griseum sp. nov., Undibacterium hunanense sp. nov., Undibacterium luofuense sp. nov., Undibacterium nitidum sp. nov., Undibacterium rivi sp. nov., Undibacterium rugosum sp. nov. and Undibacterium umbellatum sp. nov., isolated from streams in China
    Lu, Huibin
    Liu, Fei
    Deng, Tongchu
    Xu, Meiying
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (10)
  • [3] Lactobacillus jixianensis sp. nov., Lactobacillus baoqingensis sp. nov., Lactobacillus jiayinensis sp. nov., Lactobacillus zhaoyuanensis sp. nov., Lactobacillus lindianensis sp. nov., Lactobacillus huananensis sp. nov., Lactobacillus tangyuanensis sp. nov., Lactobacillus fuyuanensis sp. nov., Lactobacillus tongjiangensis sp. nov., Lactobacillus fujinensis sp. nov. and Lactobacillus mulengensis sp. nov., isolated from Chinese traditional pickle
    Long, Guang Yun
    Gu, Chun Tao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (08) : 2340 - 2353
  • [4] Lactobacillus hegangensis sp. nov., Lactobacillus suibinensis sp. nov., Lactobacillus daqingensis sp. nov., Lactobacillus yichunensis sp. nov., Lactobacillus mulanensis sp. nov., Lactobacillus achengensis sp. nov., Lactobacillus wuchangensis sp. nov., Lactobacillus gannanensis sp. nov., Lactobacillus binensis sp. nov. and Lactobacillus angrenensis sp. nov., isolated from Chinese traditional pickle and yogurt
    Long, Guang Yun
    Wei, Yu Xin
    Tu, Wan
    Gu, Chun Tao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (04) : 2467 - 2484
  • [5] Duganella albus sp. nov., Duganella aquatilis sp. nov., Duganella pernnla sp. nov. and Duganella levis sp. nov., isolated from subtropical streams in China
    Lu, Huibin
    Deng, Tongchu
    Liu, Feifei
    Wang, Yonghong
    Yang, Xunan
    Xu, Meiying
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (06) : 3801 - 3808
  • [6] Alkaliphilus flagellatus sp. nov., Butyricicoccus intestinisimiae sp. nov., Clostridium mobile sp. nov., Clostridium simiarum sp. nov., Dysosmobacter acutus sp. nov., Paenibacillus brevis sp. nov., Peptoniphilus ovalis sp. nov. and Tissierella simiarum sp. nov., isolated from monkey faeces
    Li, Dan-Hua
    Abuduaini, Rexiding
    Du, Meng-Xuan
    Wang, Yu-Jing
    Chen, Hong-He
    Zhou, Nan
    Zhu, Hai-Zhen
    Lu, Yong
    Yu, Pei-Jun
    Yang, Yun-Peng
    Jiang, Cheng-Ying
    Sun, Qiang
    Liu, Chang
    Liu, Shuang-Jiang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (03)
  • [7] Lactobacillus pingfangensis sp. nov., Lactobacillus daoliensis sp. nov., Lactobacillus nangangensis sp. nov., Lactobacillus daowaiensis sp. nov., Lactobacillus dongliensis sp. nov., Lactobacillus songbeiensis sp. nov. and Lactobacillus kaifaensis sp. nov., isolated from traditional Chinese pickle
    Liu, Dan Dan
    Gu, Chun Tao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (10) : 3251 - 3261
  • [8] Microbacterium humicola sp. nov., Microbacterium terrisoli sp. nov., Paenibacillus pedocola sp. nov., Paenibacillus silviterrae sp. nov., Flavobacterium terrisoli sp. nov., and Aquabacterium humicola sp. nov., isolated from soil
    Lee, Hyosun
    Chaudhary, Dhiraj Kumar
    Lee, Ki-Eun
    Cha, In-Tae
    Chi, Won-Jae
    Kim, Dong- Uk
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (08)
  • [9] Lactobacillus yilanensis sp. nov., Lactobacillus bayanensis sp. nov., Lactobacillus keshanensis sp. nov., Lactobacillus kedongensis sp. nov., Lactobacillus baiquanensis sp. nov., Lactobacillus jidongensis sp. nov., Lactobacillus hulinensis sp. nov., Lactobacillus mishanensis sp. nov. and Lactobacillus zhongbaensis sp. nov., isolated from Chinese traditional pickle and yogurt
    Wei, Yu Xin
    Gu, Chun Tao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (10) : 3183 - 3195
  • [10] Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis thaliana phyllosphere
    Qi, Shan Shan
    Cnockaert, Margo
    Carlier, Aurelien
    Vandamme, Peter A.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (04)