Deinococcus arenicola sp. nov., a novel radiation- resistant bacterium isolated from sandy soil in Antarctica

被引:2
|
作者
Cheng, Li [1 ]
Mu, Hongmei [1 ]
Zhang, Xinyu [1 ]
Jiang, Peiqiang [1 ]
Liu, Lukuan [1 ]
Li, Jing [1 ]
机构
[1] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Shandong, Peoples R China
基金
国家重点研发计划;
关键词
Antarctic soil; Deinococcus; new taxa; taxonomy; MICROBIAL GENOMES; RADIODURANS R1; GEN-NOV; MEMBER; CELLS; DNA;
D O I
10.1099/ijsem.0.006397
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain- positive, aerobic, non- mobile and spherical strain, designated ZS9- 10 T , belonging to the genus Deinococcus was isolated from soil sampled at the Chinese Zhong Shan Station, Antarctica. Growth was observed in the presence of 0-4 % (w/v) NaCl, at pH 7.0-8.0 and at 4-25 degrees C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain ZS9- 10 T formed a lineage in the genus Deinococcus . It exhibited highest sequence similarity (97.4 %) to Deinococcus marmoris DSM 12784 T . The major phospholipids of ZS9- 10 T were unidentified phosphoglycolipid, unidentified glycolipids and unidentified lipids. The major fatty acids were summed feature 3 (C 16:1 omega 7 c and/or C 16: 1 omega 6 c ), C 16: 0 and C 16: 1 omega 7 c . MK - 8 was the predominant respiratory quinone. The digital DNA-DNA hybridization and average nucleotide identity values between strain ZS9- 10 T and its close relative D. marmoris DSM 12784 T were 27.4 and 83.9 %, respectively. Based on phenotypic, phylogenetic and genotypic data, a novel species, named Deinococcus arenicola sp. nov., is proposed. The type strain iis ZS9- 10 T (=CCTCC AB 2019392 T =KCTC43192 T ).
引用
收藏
页数:10
相关论文
共 50 条
  • [31] Flavobacterium agrisoli sp. nov., a novel bacterium isolated from soil
    Li, Weilan
    Ten, Leonid N.
    Kim, Myung Kyum
    Lee, Seung-Yeol
    Jung, Hee-Young
    ARCHIVES OF MICROBIOLOGY, 2021, 203 (07) : 4201 - 4208
  • [32] Hymenobacter agri sp. nov., a novel bacterium isolated from soil
    Jigon Han
    Leonid N. Ten
    Dong Hoon Lee
    In-Kyu Kang
    Hee-Young Jung
    Antonie van Leeuwenhoek, 2018, 111 : 1815 - 1823
  • [33] Cohnella candidum sp. nov., radiation-resistant bacterium from soil
    Maeng, SooHyun
    Kim, Myung Kyum
    Jang, Jun Hwee
    Yi, Hana
    Subramani, Gayathri
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (07): : 1029 - 1037
  • [34] Cohnella candidum sp. nov., radiation-resistant bacterium from soil
    SooHyun Maeng
    Myung Kyum Kim
    Jun Hwee Jang
    Hana Yi
    Gayathri Subramani
    Antonie van Leeuwenhoek, 2019, 112 : 1029 - 1037
  • [35] Paenibacillus albus sp. nov., a UV radiation-resistant bacterium isolated from soil in Korea
    Jun Hwee Jang
    Soo Hyun Maeng
    Srinivasan Sathiyaraj
    Gayathri Subramani
    Hee Young Jung
    Myung Kyum Kim
    Archives of Microbiology, 2019, 201 : 1111 - 1118
  • [36] Paenibacillus albus sp. nov., a UV radiation-resistant bacterium isolated from soil in Korea
    Jang, Jun Hwee
    Maeng, Soo Hyun
    Sathiyaraj, Srinivasan
    Subramani, Gayathri
    Jung, Hee Young
    Kim, Myung Kyum
    ARCHIVES OF MICROBIOLOGY, 2019, 201 (08) : 1111 - 1118
  • [37] Deinococcusradioresistens sp. nov., a UV and gamma radiation-resistant bacterium isolated from mountain soil
    Sathiyaraj Srinivasan
    Jae-Jin Lee
    Sang-Yong Lim
    Min-Ho Joe
    Seong-Hun Im
    Myung Kyum Kim
    Antonie van Leeuwenhoek, 2015, 107 : 539 - 545
  • [38] Deinococcus koreensis sp nov., a gamma radiation-resistant bacterium isolated from river water
    Baek, Kiwoon
    Chung, Eu Jin
    Choi, Gang-Guk
    Kim, Min-Kyu
    Lim, Sangyong
    Choi, Ahyoung
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (08) : 2545 - 2550
  • [39] Deinococcus mumbaiensis sp nov., a radiation-resistant pleomorphic bacterium isolated from Mumbai, India
    Shashidhar, R
    Bandekar, JR
    FEMS MICROBIOLOGY LETTERS, 2006, 254 (02) : 275 - 280
  • [40] Glycomyces niveus sp. nov., a novel actinomycete isolated from sandy soil
    Yang, Xilang
    Cao, Hanshui
    Xu, Xi
    Xie, Jiayue
    Chen, Jie
    Xiang, Wensheng
    Zhao, Junwei
    Wang, Xiangjing
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (02)