Deinococcus arenicola sp. nov., a novel radiation- resistant bacterium isolated from sandy soil in Antarctica

被引:2
|
作者
Cheng, Li [1 ]
Mu, Hongmei [1 ]
Zhang, Xinyu [1 ]
Jiang, Peiqiang [1 ]
Liu, Lukuan [1 ]
Li, Jing [1 ]
机构
[1] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Shandong, Peoples R China
基金
国家重点研发计划;
关键词
Antarctic soil; Deinococcus; new taxa; taxonomy; MICROBIAL GENOMES; RADIODURANS R1; GEN-NOV; MEMBER; CELLS; DNA;
D O I
10.1099/ijsem.0.006397
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain- positive, aerobic, non- mobile and spherical strain, designated ZS9- 10 T , belonging to the genus Deinococcus was isolated from soil sampled at the Chinese Zhong Shan Station, Antarctica. Growth was observed in the presence of 0-4 % (w/v) NaCl, at pH 7.0-8.0 and at 4-25 degrees C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain ZS9- 10 T formed a lineage in the genus Deinococcus . It exhibited highest sequence similarity (97.4 %) to Deinococcus marmoris DSM 12784 T . The major phospholipids of ZS9- 10 T were unidentified phosphoglycolipid, unidentified glycolipids and unidentified lipids. The major fatty acids were summed feature 3 (C 16:1 omega 7 c and/or C 16: 1 omega 6 c ), C 16: 0 and C 16: 1 omega 7 c . MK - 8 was the predominant respiratory quinone. The digital DNA-DNA hybridization and average nucleotide identity values between strain ZS9- 10 T and its close relative D. marmoris DSM 12784 T were 27.4 and 83.9 %, respectively. Based on phenotypic, phylogenetic and genotypic data, a novel species, named Deinococcus arenicola sp. nov., is proposed. The type strain iis ZS9- 10 T (=CCTCC AB 2019392 T =KCTC43192 T ).
引用
收藏
页数:10
相关论文
共 50 条
  • [21] Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil
    Yuna Park
    Leonid N. Ten
    Young Koung Lee
    Hee‑Young Jung
    Myung Kyum Kim
    Archives of Microbiology, 2022, 204
  • [22] Carnobacterium antarcticum sp nov., a psychrotolerant, alkaliphilic bacterium isolated from sandy soil in Antarctica
    Zhu, Sidong
    Lin, Danqiu
    Xiong, Shangling
    Wang, Xing
    Xue, Zehao
    Dong, Bingxia
    Shen, Xudong
    Ma, Xiangdong
    Chen, Jigang
    Yang, Jifang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (05) : 1672 - 1677
  • [23] Microbacterium radiodurans sp. nov., a UV radiation-resistant bacterium isolated from soil
    Zhang, Wei
    Zhu, Hong-hui
    Yuan, Menglong
    Yao, Qing
    Tang, Ran
    Lin, Min
    Yang, Song-zhen
    Li, Zhi-kun
    Chen, Ming
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 : 2665 - 2670
  • [24] Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil
    Park, Yuna
    Ten, Leonid N.
    Lee, Young Koung
    Jung, Hee-Young
    Kim, Myung Kyum
    ARCHIVES OF MICROBIOLOGY, 2022, 204 (03)
  • [25] Deinococcus piscis sp nov., a radiation-resistant bacterium isolated from a marine fish
    Shashidhar, Ravindranath
    Bandekar, Jayant R.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 2714 - 2717
  • [26] Deinococcus knuensis sp. nov., a bacterium isolated from river water
    Jae-Jin Lee
    Yeon-Hee Lee
    Su-Jin Park
    Seung-Yeol Lee
    Sangkyu Park
    Dae Sung Lee
    In-Kyu Kang
    Leonid N. Ten
    Hee-Young Jung
    Antonie van Leeuwenhoek, 2017, 110 : 407 - 414
  • [27] Deinococcus puniceus sp nov., a Bacterium Isolated from Soil-Irradiated Gamma Radiation
    Lee, Jae-Jin
    Srinivasan, Sathiyaraj
    Lim, Sangyong
    Joe, Minho
    Im, Seonghun
    Kim, Myung Kyum
    CURRENT MICROBIOLOGY, 2015, 70 (04) : 464 - 469
  • [28] Flavobacterium agrisoli sp. nov., a novel bacterium isolated from soil
    Weilan Li
    Leonid N. Ten
    Myung Kyum Kim
    Seung-Yeol Lee
    Hee-Young Jung
    Archives of Microbiology, 2021, 203 : 4201 - 4208
  • [29] Pedobacter segetis sp. nov., a Novel Bacterium Isolated from Soil
    Leonid N. Ten
    Weilan Li
    Soo-Min Hong
    Myung Kyum Kim
    Seung-Yeol Lee
    Hee-Young Jung
    Current Microbiology, 2022, 79
  • [30] Pedobacter segetis sp. nov., a Novel Bacterium Isolated from Soil
    Ten, Leonid N.
    Li, Weilan
    Hong, Soo-Min
    Kim, Myung Kyum
    Lee, Seung-Yeol
    Jung, Hee-Young
    CURRENT MICROBIOLOGY, 2022, 79 (02)