Deinococcus arenicola sp. nov., a novel radiation- resistant bacterium isolated from sandy soil in Antarctica

被引:2
|
作者
Cheng, Li [1 ]
Mu, Hongmei [1 ]
Zhang, Xinyu [1 ]
Jiang, Peiqiang [1 ]
Liu, Lukuan [1 ]
Li, Jing [1 ]
机构
[1] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Shandong, Peoples R China
基金
国家重点研发计划;
关键词
Antarctic soil; Deinococcus; new taxa; taxonomy; MICROBIAL GENOMES; RADIODURANS R1; GEN-NOV; MEMBER; CELLS; DNA;
D O I
10.1099/ijsem.0.006397
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain- positive, aerobic, non- mobile and spherical strain, designated ZS9- 10 T , belonging to the genus Deinococcus was isolated from soil sampled at the Chinese Zhong Shan Station, Antarctica. Growth was observed in the presence of 0-4 % (w/v) NaCl, at pH 7.0-8.0 and at 4-25 degrees C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain ZS9- 10 T formed a lineage in the genus Deinococcus . It exhibited highest sequence similarity (97.4 %) to Deinococcus marmoris DSM 12784 T . The major phospholipids of ZS9- 10 T were unidentified phosphoglycolipid, unidentified glycolipids and unidentified lipids. The major fatty acids were summed feature 3 (C 16:1 omega 7 c and/or C 16: 1 omega 6 c ), C 16: 0 and C 16: 1 omega 7 c . MK - 8 was the predominant respiratory quinone. The digital DNA-DNA hybridization and average nucleotide identity values between strain ZS9- 10 T and its close relative D. marmoris DSM 12784 T were 27.4 and 83.9 %, respectively. Based on phenotypic, phylogenetic and genotypic data, a novel species, named Deinococcus arenicola sp. nov., is proposed. The type strain iis ZS9- 10 T (=CCTCC AB 2019392 T =KCTC43192 T ).
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Deinococcus swuensis sp. nov., a gamma-radiation-resistant bacterium isolated from soil
    Jae-Jin Lee
    Hyun Ji Lee
    Gi Seon Jang
    Ja Myoung Yu
    Ji Yoon Cha
    Su Jeong Kim
    Eun Bit Lee
    Myung Kyum Kim
    Journal of Microbiology, 2013, 51 : 305 - 311
  • [2] Deinococcus ruber sp nov., a radiation-resistant bacterium isolated from soil
    Kim, Eun Bit
    Kang, Myung Suk
    Joo, Eun Sun
    Jeon, Seon Hwa
    Jeong, Sun Wook
    Lim, Sang Yong
    Jung, Hee Young
    Srinivasan, Sathiyaraj
    Kim, Myung Kyum
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (01) : 72 - 76
  • [3] Deinococcus detaillensis sp. nov., isolated from humus soil in Antarctica
    Kun Zhang
    Jing Zhu
    Shuai Li
    Manik Prabhu Narsing Rao
    Ning-Mei Li
    Ang-Yang Guo
    Zhao Jiang
    Qi-Yong Tang
    Yi Wan
    Zhi-Dong Zhang
    Wen-Jun Li
    Archives of Microbiology, 2020, 202 : 2493 - 2498
  • [4] Deinococcus soli sp. nov., a Gamma-Radiation-Resistant Bacterium Isolated from Rice Field Soil
    Seho Cha
    Sathiyaraj Srinivasan
    Taegun Seo
    Myung Kyum Kim
    Current Microbiology, 2014, 68 : 777 - 783
  • [5] Deinococcus wulumuqiensis sp. nov., and Deinococcus xibeiensis sp. nov., isolated from radiation-polluted soil
    Wang, Wei
    Mao, Jun
    Zhang, Zhidong
    Tang, Qiyong
    Xie, Yuqing
    Zhu, Jing
    Zhang, Lixin
    Liu, Zhiheng
    Shi, Yuhu
    Goodfellow, Michael
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 : 2006 - 2010
  • [6] Deinococcus swuensis sp nov., a gamma-radiation-resistant bacterium isolated from soil
    Lee, Jae-Jin
    Lee, Hyun Ji
    Jang, Gi Seon
    Yu, Ja Myoung
    Cha, Ji Yoon
    Kim, Su Jeong
    Lee, Eun Bit
    Kim, Myung Kyum
    JOURNAL OF MICROBIOLOGY, 2013, 51 (03) : 305 - 311
  • [7] Deinococcus taeanensis sp. nov., a Radiation-Resistant Bacterium Isolated from a Coastal Dune
    Lee, Ji Hee
    Jung, Jong-Hyun
    Kim, Min-Kyu
    Lim, Sangyong
    CURRENT MICROBIOLOGY, 2022, 79 (11)
  • [8] Deinococcus taeanensis sp. nov., a Radiation-Resistant Bacterium Isolated from a Coastal Dune
    Ji Hee Lee
    Jong-Hyun Jung
    Min-Kyu Kim
    Sangyong Lim
    Current Microbiology, 2022, 79
  • [9] Deinococcus puniceus sp. nov., a Bacterium Isolated from Soil-Irradiated Gamma Radiation
    Jae-Jin Lee
    Sathiyaraj Srinivasan
    Sangyong Lim
    Minho Joe
    Seonghun Im
    Myung Kyum Kim
    Current Microbiology, 2015, 70 : 464 - 469
  • [10] Deinococcus persicinus sp nov., a radiation-resistant bacterium from soil
    Jeon, Sean Hwa
    Kang, Myung-Suk
    Joo, Fun Sun
    Kim, Fun Bit
    Lim, Sangyong
    Jeong, Sun-Wook
    Jung, Hee-Young
    Srinivasan, Sathiyaraj
    Kim, Myung Kyum
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 5077 - 5082