Evaluation of plasma-derived extracellular vesicles miRNAs and their connection with hippocampal mRNAs in alcohol use disorder

被引:1
|
作者
Wang, Jie-quan [1 ,2 ,3 ,4 ]
Liang, Jun [1 ,2 ,3 ,4 ]
Wang, Jin-liang [1 ,2 ,3 ,4 ]
Shan, Feng [1 ,2 ,3 ,4 ]
Cao, Yin [1 ,2 ,3 ,4 ]
Zhou, Xuan [1 ,2 ,3 ,4 ]
Yan, Chun-Yu [1 ,2 ,3 ,4 ]
Xia, Qing-rong [1 ,2 ,3 ,4 ]
Liu, Ya-ru [5 ,6 ]
机构
[1] Anhui Med Univ, Affiliated Psychol Hosp, Dept Pharm, Hefei 230000, Anhui, Peoples R China
[2] Anhui Mental Hlth Ctr, Psychopharmacol Res Lab, Hefei 230000, Peoples R China
[3] Hefei Fourth Peoples Hosp, Dept Pharm, Hefei 230000, Peoples R China
[4] Anhui Clin Res Ctr Mental Disorders, Hefei 230000, Peoples R China
[5] Anhui Med Univ, Affiliated Hosp 1, Dept Pharm, Hefei 230001, Anhui, Peoples R China
[6] State Adm Tradit Chinese Med, Grade Pharmaceut Chem Lab 3, Hefei 230001, Peoples R China
基金
中国国家自然科学基金;
关键词
Alcohol use disorder; Plasma -derived sEVs; Small RNA sequencing; Machine learning; Noninvasive biomarkers; miRNA-mRNA network;
D O I
10.1016/j.lfs.2024.122820
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Alcohol use disorder (AUD) is a common mental illness with high morbidity and disability. The discovery of laboratory biomarkers has progressed slowly, resulting in suboptimal diagnosis and treatment of AUD. This study aimed to identify promising biomarkers, as well as the potential miRNA-mRNA networks associated with AUD pathogenesis. RNA sequencing was performed on plasma -derived small extracellular vesicles (sEVs) from AUD patients and healthy controls (HCs) to harvest miRNAs expression profiles. Machine learning (ML) models were built to screen characteristic miRNAs, whose target mRNAs were analyzed using TargetScan, miRanda and miRDB databases. Gene Expression Omnibus (GEO) datasets (GSE181804 and GSE180722) providing postmortem hippocampal gene expression profiles of AUD subjects were mined. A total of 247 differentially expressed (DE) plasma -derived sEVs miRNAs and 122 DE hippocampal mRNAs were obtained. Then, 22 overlapping sEVs miRNAs with high importance scores were gained by intersecting 5 ML models. As a result, we established a putative sEVs miRNA-hippocampal mRNA network that can effectively distinguish AUD patients from HCs. In conclusion, we proposed 5 AUD-representative sEVs miRNAs (hsa-miR-144-5p, hsa-miR-182-5p, hsa-miR-1425p, hsa-miR-7-5p, and hsa-miR-15b-5p) that may participate in the pathogenesis of AUD by modulating downstream target hippocampal genes. These findings may provide novel insights into the diagnosis and treatment of AUD.
引用
收藏
页数:13
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