Genome-wide analysis of glutathione reductase (GR) genes from rice and Arabidopsis

被引:57
|
作者
Trivedi, Dipesh Kumar [1 ]
Gill, Sarvajeet Singh [2 ]
Yadav, Sandep [1 ]
Tuteja, Narendra [1 ]
机构
[1] Int Ctr Genet Engn & Biotechnol, Plant Mol Biol Grp, Aruna Asaf Ali Marg, New Delhi, India
[2] Maharshi Dayanand Univ, Ctr Biotechnol, Stress Physiol & Mol Biol Lab, Rohtak, Haryana, India
关键词
abiotic stress; Arabidopsis; chromosome localization; genome-wide analysis; glutathione reductase; homology modeling; phylogenetic analysis; riceoxidative;
D O I
10.4161/psb.23021
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Plant cells and tissues remain always on risk under abiotic and biotic stresses due to increased production of reactive oxygen species (ROS). Plants protect themselves against ROS induced oxidative damage by the upregulation of antioxidant machinery. Out of many components of antioxidant machinery, glutathione reductase (GR, EC 1.6.4.2) and glutathione (GSH, gamma-Glu-Cys-Gly) play important role in the protection of cell against oxidative damage. In stress condition, the GR helps in maintaining the reduced glutathione pool for strengthening the antioxidative processes in plants. Present study investigates genome wide analysis of GR from rice and Arabidopsis. We were able to identify 3 rice GR genes (LOC_Os02 g56850, LOC_Os03 g06740, LOC_Os10 g28000) and 2 Arabidopsis GR genes(AT3G54660, AT3G24170) from their respective genomes on the basis of their annotation as well as the presence of pyridine nucleotide-disulphide oxidoreductases class-I active site. The evolutionary relationship of the GR genes from rice and Arabidopsis genomes was analyzed using the multiple sequence alignment and phylogenetic tree. This revealed evolutionary conserved pyridine nucleotide-disulphide oxidoreductases class-I active site among the GR protein in rice and Arabidopsis. This study should make an important contribution to our better understanding of the GR under normal and stress condition in plants.
引用
收藏
页数:7
相关论文
共 50 条
  • [31] Genome-wide analysis of helicase gene family from rice and Arabidopsis: a comparison with yeast and human
    Pavan Umate
    Renu Tuteja
    Narendra Tuteja
    Plant Molecular Biology, 2010, 73 : 449 - 465
  • [32] Genome-wide analysis of helicase gene family from rice and Arabidopsis: a comparison with yeast and human
    Umate, Pavan
    Tuteja, Renu
    Tuteja, Narendra
    PLANT MOLECULAR BIOLOGY, 2010, 73 (4-5) : 449 - 465
  • [33] Genome-wide analysis of lectin receptor-like kinase family from Arabidopsis and rice
    Neha Vaid
    Prashant Kumar Pandey
    Narendra Tuteja
    Plant Molecular Biology, 2012, 80 : 365 - 388
  • [34] Genome-wide Comparative Analysis of the GRAS Gene Family in Populus, Arabidopsis and Rice
    Liu, Xuanyu
    Widmer, Alex
    PLANT MOLECULAR BIOLOGY REPORTER, 2014, 32 (06) : 1129 - 1145
  • [35] Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis
    Jingkang Guo a
    遗传学报, 2008, (02) : 105 - 118
  • [36] Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families
    Diego Lijavetzky
    Pilar Carbonero
    Jesús Vicente-Carbajosa
    BMC Evolutionary Biology, 3
  • [37] Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis
    Guo, Jingkang
    Wu, Jian
    Ji, Qian
    Wang, Chao
    Luo, Lei
    Yuan, Yi
    Wang, Yonghua
    Wang, Jian
    JOURNAL OF GENETICS AND GENOMICS, 2008, 35 (02) : 105 - 118
  • [38] Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families
    Lijavetzky, D
    Carbonero, P
    Vicente-Carbajosa, J
    BMC EVOLUTIONARY BIOLOGY, 2003, 3 (1)
  • [39] Genome-wide Comparative Analysis of the GRAS Gene Family in Populus, Arabidopsis and Rice
    Xuanyu Liu
    Alex Widmer
    Plant Molecular Biology Reporter, 2014, 32 : 1129 - 1145
  • [40] Genome-Wide Identification and Functional Analysis of Genes Expressed Ubiquitously in Rice
    Jung, Ki-Hong
    Kim, Sung-Ruyl
    Giong, Hoi-Khoanh
    Minh Xuan Nguyen
    Koh, Hyun-Jung
    An, Gynheung
    MOLECULAR PLANT, 2015, 8 (02) : 276 - 289