Complete Genome Sequences of Peach Latent Mosaic Viroid from a Single Peach Cultivar

被引:1
|
作者
Jo, Yeonhwa [1 ]
Yoo, Su-Hyun [1 ]
Chu, Hyosub [1 ]
Cho, Jin Kyong [2 ]
Choi, Hoseong [1 ]
Yoon, Ju-Yeon [3 ]
Choi, Seung-Kook [3 ]
Cho, Won Kyong [1 ]
机构
[1] Seoul Natl Univ, Coll Agr & Life Sci, Dept Agr Biotechnol, Seoul, South Korea
[2] Korea Natl Coll Agr & Fisheries, Dept Fruit Tree, Jeonju, South Korea
[3] RDA, Natl Inst Hort & Herbal Sci, Virol Unit, Dept Hort Environm, Wan Ju, South Korea
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D O I
10.1128/genomeA.01098-15
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学科分类号
摘要
Peach latent mosaic viroid (PLMVd) is a member of the genus Pelamoviroid in the family Avsunviroidae and infects peach trees. We de novo assembled a PLMVd genome from a peach transcriptome and identified 18 variants in a single peach cultivar, after sequencing 20 PLMVd genomes by Sanger sequencing.
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