Importance sampling;
Model discrimination;
Parameter estimation;
Pareto smoothing;
Sequential Monte Carlo;
Total entropy;
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摘要:
This article presents a novel Laplace-based algorithm that can be used to find Bayesian adaptive designs under model and parameter uncertainty. Our algorithm uses Laplace importance sampling to provide a computationally efficient approach to undertake adaptive design and inference when compared to standard approaches such as those based on the sequential Monte Carlo (SMC) algorithm. Like the SMC approach, our new algorithm requires very little problem-specific tuning and provides an efficient estimate of utility functions for parameter estimation and/or model choice. Further, within our algorithm, we adopt methods from Pareto smoothing to improve the robustness of the algorithm in forming particle approximations to posterior distributions. To evaluate our new adaptive design algorithm, three motivating examples from the literature are considered including examples where binary, multiple response and count data are observed under considerable model and parameter uncertainty. We benchmark the performance of our new algorithm against: (1) the standard SMC algorithm and (2) a standard implementation of the Laplace approximation in adaptive design. We assess the performance of each algorithm through comparing computational efficiency and design selection. The results show that our new algorithm is computationally efficient and selects designs that can perform as well as or better than the other two approaches. As such, we propose our Laplace-based algorithm as an efficient approach for designing adaptive experiments.
机构:
North China Univ Technol, Coll Informat Engn, Beijing 100144, Peoples R ChinaNorth China Univ Technol, Coll Informat Engn, Beijing 100144, Peoples R China
Liu, Zhi
Zhang, Mengmeng
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North China Univ Technol, Coll Informat Engn, Beijing 100144, Peoples R ChinaNorth China Univ Technol, Coll Informat Engn, Beijing 100144, Peoples R China
Zhang, Mengmeng
Cui, Jian
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North China Univ Technol, Coll Informat Engn, Beijing 100144, Peoples R ChinaNorth China Univ Technol, Coll Informat Engn, Beijing 100144, Peoples R China
机构:
Department of Applied Chemistry, School of Science and Technology, Meiji University, Kawasaki, KanagawaDepartment of Applied Chemistry, School of Science and Technology, Meiji University, Kawasaki, Kanagawa
Iwama R.
Kaneko H.
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机构:
Department of Applied Chemistry, School of Science and Technology, Meiji University, Kawasaki, KanagawaDepartment of Applied Chemistry, School of Science and Technology, Meiji University, Kawasaki, Kanagawa
机构:
Zhejiang Univ, Adv Digital Technol & Instrumentat, Hangzhou 310027, Zhejiang, Peoples R ChinaZhejiang Univ, Adv Digital Technol & Instrumentat, Hangzhou 310027, Zhejiang, Peoples R China
Lin, Zhenwei
Chen, Yaowu
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机构:
Zhejiang Univ, Engn Res Ctr, Embedded Syst Educ Dept, Hangzhou 310027, Zhejiang, Peoples R ChinaZhejiang Univ, Adv Digital Technol & Instrumentat, Hangzhou 310027, Zhejiang, Peoples R China
Chen, Yaowu
Liu, Xuesong
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机构:
Zhejiang Univ, State Key Lab Ind Control Technol, Hangzhou 310027, Zhejiang, Peoples R ChinaZhejiang Univ, Adv Digital Technol & Instrumentat, Hangzhou 310027, Zhejiang, Peoples R China
Liu, Xuesong
Jiang, Rongxin
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机构:
Zhejiang Univ, Zhejiang Prov Key Lab Network Multimedia Technol, Hangzhou 310027, Zhejiang, Peoples R ChinaZhejiang Univ, Adv Digital Technol & Instrumentat, Hangzhou 310027, Zhejiang, Peoples R China
Jiang, Rongxin
Shen, Binjian
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机构:
Chinese Acad Sci, Inst Deep Sea Sci & Engn, Haikou 572000, Hainan, Peoples R ChinaZhejiang Univ, Adv Digital Technol & Instrumentat, Hangzhou 310027, Zhejiang, Peoples R China
机构:
Fudan Univ, Sch Publ Hlth, Dept Biostat, Shanghai, Peoples R ChinaFudan Univ, Sch Publ Hlth, Dept Biostat, Shanghai, Peoples R China
Guo, Wentian
Ji, Yuan
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机构:
Northshore Univ HealthSyst, Program Computat Genom & Med, Evanston, IL 60201 USA
Univ Chicago, Dept Publ Hlth Sci, Chicago, IL 60637 USAFudan Univ, Sch Publ Hlth, Dept Biostat, Shanghai, Peoples R China
Ji, Yuan
Catenacci, Daniel V. T.
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机构:
Univ Chicago, Med Ctr, Dept Med, Sect Hematol & Oncol, Chicago, IL 60637 USA
Univ Chicago, Med Ctr, Chicago, IL 60637 USAFudan Univ, Sch Publ Hlth, Dept Biostat, Shanghai, Peoples R China