The structure of the enzyme-substrate complex of the phosphodiesterase catalytic domain with cyclic diguanosine monophosphate

被引:0
|
作者
Grigorenko B.L. [1 ]
Nemukhin A.V. [1 ]
Khrenova M.G. [1 ]
Novichkova D.A. [1 ]
机构
[1] Department of Chemistry, Moscow State University, Moscow
基金
俄罗斯基础研究基金会;
关键词
cyclic diguanosine monophosphate; phosphodiesterases; QM/MM;
D O I
10.3103/S0027131414010040
中图分类号
学科分类号
摘要
A three-dimensional, all-atom structure of the enzyme-substrate complex of the phosphodiesterase catalytic domain with diguanosine monophosphate was constructed based on the results of hybrid quantum mechanics/molecular mechanics (QM/MM) calculations. © 2014 Allerton Press, Inc.
引用
收藏
页码:1 / 4
页数:3
相关论文
共 50 条
  • [21] Simple carbonic anhydrase model which achieves catalytic hydrolysis by the formation of an 'enzyme-substrate'-like complex
    Sprigings, TG
    Hall, CD
    JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 2001, (11): : 2063 - 2067
  • [22] MODIFICATION OF ENZYME-SUBSTRATE INTERMEDIATES - REACTION OF TETRANITROMETHANE WITH AN ALDOLASE-SUBSTRATE COMPLEX
    CHRISTEN, P
    RIORDAN, JF
    FEDERATION PROCEEDINGS, 1968, 27 (02) : 291 - &
  • [23] Non-competitive cyclic peptides for targeting enzyme-substrate complexes
    McAllister, T. E.
    Yeh, T. -L.
    Abboud, M. I.
    Leung, I. K. H.
    Hookway, E. S.
    King, O. N. F.
    Bhushan, B.
    Williams, S. T.
    Hopkinson, R. J.
    Munzel, M.
    Loik, N. D.
    Chowdhury, R.
    Oppermann, U.
    Claridge, T. D. W.
    Goto, Y.
    Suga, H.
    Schofield, C. J.
    Kawamura, A.
    CHEMICAL SCIENCE, 2018, 9 (20) : 4569 - 4578
  • [24] RESTRICTED INTRAMOLECULAR ENERGY-FLOW IN THE ENZYME-SUBSTRATE COMPLEX
    SOLC, M
    JOURNAL OF THEORETICAL BIOLOGY, 1995, 175 (01) : 57 - 61
  • [25] The enzyme-substrate complex as a cat state: A toy quantum analog
    Svetlichny, George
    BIOSYSTEMS, 2017, 162 : 157 - 167
  • [26] STUDIES ON THE FORMATION OF AN ENZYME-SUBSTRATE COMPLEX BETWEEN MYOSIN AND ADENOSINETRIPHOSPHATE
    NANNINGA, LB
    MOMMAERTS, WFHM
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1960, 46 (08) : 1155 - 1166
  • [28] SPECTRUM OF AN ENZYME-SUBSTRATE COMPLEX OF D-AMINOACID OXIDASE
    YAGI, K
    OZAWA, T
    NAOI, M
    JOURNAL OF BIOCHEMISTRY, 1964, 56 (05): : 487 - &
  • [29] MITOCHONDRIAL CALCIUM PUMP - DETECTION OF ENZYME-SUBSTRATE TYPE OF COMPLEX
    ROSSI, CS
    ALEXANDR.A
    ROSSI, CR
    JOURNAL OF CELL BIOLOGY, 1973, 59 (02): : A292 - A292
  • [30] Transient kinetics of enzyme reactions involving the stages of enzyme-substrate complex isomerization
    Saifullin, SR
    Kurganov, BI
    BIOCHEMISTRY-MOSCOW, 1996, 61 (02) : 277 - 283