Development and characterization of 38 SNP markers in the true limpet Patelloida pygmaea

被引:0
|
作者
Ruoran Li
Yunhui Wang
Xiaoyue Sun
Yanran Xu
Jiangyong Qu
Xumin Wang
机构
[1] Yantai University,College of Life Sciences
来源
Conservation Genetics Resources | 2020年 / 12卷
关键词
SNP markers; Population genetic diversity; Conservation genetics;
D O I
暂无
中图分类号
学科分类号
摘要
In this study, 38 single nucleotide polymorphism (SNP) markers were developed and characterized in Patelloida pygmaea. The minor allele frequency raged from 0.0833 to 0.5000. The observed heterozygosity varied from 0.0000 to 1.000, and the expected heterozygosity varied from 0.1197 to 0.5496. Polymorphic information content ranged from 0.1103 to 0.4316. The inbreeding coefficient values varied from − 0.3330 to 0.8686. Eleven loci showed significant deviations from the Hardy–Weinberg equilibrium (P < 0.05). The polymorphic SNPs will be useful for the further studies of population genetics and natural resource conservation of P. pygmaea.
引用
收藏
页码:367 / 371
页数:4
相关论文
共 50 条
  • [21] Development and characterization of 177 SNP markers in the mud shrimp Upogebia major
    Wang, Chenghong
    Song, Yunqi
    Zhang, Jirui
    Sun, Donghui
    Qu, Ying
    Ni, Yan
    Jiang, Zilin
    Zhang, Shukui
    Xing, Zhikai
    Wu, Sen
    Qu, Jiangyong
    Wang, Xumin
    Wang, Lijun
    CONSERVATION GENETICS RESOURCES, 2022, 14 (02) : 183 - 193
  • [22] Development and characterization of 31 SNP markers for the Crested ibis (Nipponia nippon)
    Wenhui Niu
    Yongjie Huang
    Chenglin Zhang
    Tianchun Pu
    Yan Lu
    Ting Jia
    Yuyan You
    Yang Du
    Yu Mao
    Changqing Ding
    Conservation Genetics Resources, 2021, 13 : 5 - 7
  • [23] Development and characterization of 29 SNP markers for the Tibetan macaque (Macaca thibetana)
    Zhang, Xinshang
    Niu, Lihong
    Zhou, Liang
    Yan, Zhifeng
    Yang, Fan
    Wu, Aiming
    Min, Shaokun
    Li, Xiao
    Tao, Kaishan
    Dou, Kefeng
    Chen, Hui
    CONSERVATION GENETICS RESOURCES, 2019, 11 (04) : 381 - 383
  • [24] Development and characterization of 108 SNP markers in the Iwagaki oyster, Crassostrea nippona
    Kaikai Liu
    Hong Yu
    Qi Li
    Conservation Genetics Resources, 2019, 11 : 437 - 442
  • [25] Development and characterization of 108 SNP markers in the Iwagaki oyster, Crassostrea nippona
    Liu, Kaikai
    Yu, Hong
    Li, Qi
    CONSERVATION GENETICS RESOURCES, 2019, 11 (04) : 437 - 442
  • [26] Development and characterization of 177 SNP markers in the mud shrimp Upogebia major
    Chenghong Wang
    Yunqi Song
    Jirui Zhang
    Donghui Sun
    Ying Qu
    Yan Ni
    Zilin Jiang
    Shukui Zhang
    Zhikai Xing
    Sen Wu
    Jiangyong Qu
    Xumin Wang
    Lijun Wang
    Conservation Genetics Resources, 2022, 14 : 183 - 193
  • [27] Development and characterization of 31 SNP markers for the Crested ibis (Nipponia nippon)
    Niu, Wenhui
    Huang, Yongjie
    Zhang, Chenglin
    Pu, Tianchun
    Lu, Yan
    Jia, Ting
    You, Yuyan
    Du, Yang
    Mao, Yu
    Ding, Changqing
    CONSERVATION GENETICS RESOURCES, 2021, 13 (01) : 5 - 7
  • [28] Isolation and characterization of 38 SNP markers for the black rockfish, Sebastes schlegelii by next-generation sequencing
    Xianggang Gao
    Xiangbo Bao
    Wei Sun
    Yunfeng Li
    Zongying Liu
    Weidong Liu
    Conservation Genetics Resources, 2021, 13 : 413 - 416
  • [29] Development and characterization of 50 SNP markers in three watersheds populations of Xenocypris davidi
    Chaoqun Su
    Chenxi Tan
    Liangjie Zhao
    Xinliang Peng
    Jun Liu
    Haolong Li
    Xusheng Guo
    Conservation Genetics Resources, 2023, 15 : 29 - 47
  • [30] Development and characterization of 68 SNP markers in red sea bream, Pagrus major
    Kim, Jeong Gyu
    Yoo, Seung Hyun
    Seo, Yong Bae
    Kim, Jong-Oh
    Kim, Gun-Do
    CONSERVATION GENETICS RESOURCES, 2024, 16 (01) : 39 - 43