Analysis of Bacterial Community in the Ginseng Soil Using Denaturing Gradient Gel Electrophoresis (DGGE)

被引：0
|
作者：
Regupathy Thamizh Vendan
Sun Hee Lee
Young Joon Yu
Young Ha Rhee
机构：
[1] Agricultural College & Research Institute,Department of Microbiology
[2] Tamil Nadu Agricultural University,undefined
[3] Chungnam National University,undefined
来源：
Indian Journal of Microbiology | 2012年 / 52卷
关键词：
Korean ginseng soil; Bacterial community; DGGE;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
The objective of this work was to determine the shifts in the PCR-DGGE profiles of bacterial communities associated with the rhizosphere soil of ginseng at varying age levels. Differences in the dominance of intense DNA bands in the DGGE profile was observed over the age of the plants indicating the fluctuation in the microbial community structure. The bacterial orders of actinomycetales of Actinobacteria and Spingomonadales and Rhizobiales of α-Proteobacteria were predominant in the ginseng soil.
引用
收藏
页码：286 / 288
页数：2
相关论文
共 50 条
  • [21] Molecular analysis of 16 Turkish families with DHPR deficiency using denaturing gradient gel electrophoresis (DGGE)
    Anne Romstad
    H. Serap Kalkanoğlu
    Turgay Coşkun
    Mübeccel Demirkol
    Aysegül Tokatli
    Ali Dursun
    Tolunay Baykal
    Imran Özalp
    Per Guldberg
    Flemming Güttler
    Human Genetics, 2000, 107 : 546 - 553
  • [22] Digitization of DGGE (denaturing gradient gel electrophoresis) profile and cluster analysis of microbial communities
    Tong Zhang
    Herbert H.P. Fang
    Biotechnology Letters, 2000, 22 : 399 - 405
  • [23] Molecular analysis of 16 Turkish families with DHPR deficiency using denaturing gradient gel electrophoresis (DGGE)
    Romstad, A
    Kalkanoglu, HS
    Coskun, T
    Demirkol, M
    Tokatli, A
    Dursun, A
    Baykal, T
    Özalp, I
    Guldberg, P
    Güttler, F
    HUMAN GENETICS, 2000, 107 (06) : 546 - 553
  • [24] Digitization of DGGE (denaturing gradient gel electrophoresis) profile and cluster analysis of microbial communities
    Zhang, T
    Fang, HHP
    BIOTECHNOLOGY LETTERS, 2000, 22 (05) : 399 - 405
  • [25] Application of denaturing gradient gel electrophoresis (DGGE) to the analysis of microbial communities of subgingival plaque
    Fujimoto, C
    Maeda, H
    Kokeguchi, S
    Takashiba, S
    Nishmura, F
    Arai, H
    Fukui, K
    Murayama, Y
    JOURNAL OF PERIODONTAL RESEARCH, 2003, 38 (04) : 440 - 445
  • [26] Can denaturing gradient gel electrophoresis (DGGE) analysis of amplified 16s rDNA of soil bacterial populations be used in forensic investigations?
    Lerner, Anat
    Shor, Yaron
    Vinokurov, Asya
    Okon, Yaacov
    Jurkevitch, Edouard
    SOIL BIOLOGY & BIOCHEMISTRY, 2006, 38 (06): : 1188 - 1192
  • [27] Adulteration identification of citrus juice by denaturing gradient gel electrophoresis (DGGE)
    Liu, YS
    Shyu, YT
    JOURNAL OF FOOD AND DRUG ANALYSIS, 2006, 14 (01) : 44 - 49
  • [28] Denaturing gradient gel electrophoresis (DGGE) as a tool for identification of marine nematodes
    Cook, AA
    Bhadury, P
    Debenham, NJ
    Meldal, BHM
    Blaxter, ML
    Smerdon, GR
    Austen, MC
    Lambshead, PJD
    Rogers, AD
    MARINE ECOLOGY PROGRESS SERIES, 2005, 291 : 103 - 113
  • [29] Vertical distribution of bacterial community structure in the sediments of two eutrophic lakes revealed by denaturing gradient gel electrophoresis (DGGE) and multivariate analysis techniques
    Jin Zeng
    Liuyan Yang
    Jiayun Li
    Yi Liang
    Lin Xiao
    Lijuan Jiang
    Dayong Zhao
    World Journal of Microbiology and Biotechnology, 2009, 25 : 225 - 233
  • [30] Vertical distribution of bacterial community structure in the sediments of two eutrophic lakes revealed by denaturing gradient gel electrophoresis (DGGE) and multivariate analysis techniques
    Zeng, Jin
    Yang, Liuyan
    Li, Jiayun
    Liang, Yi
    Xiao, Lin
    Jiang, Lijuan
    Zhao, Dayong
    WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2009, 25 (02): : 225 - 233
12345