Accelerating a cross-correlation score function to search modifications using a single GPU

被引:0
|
作者
Hyunwoo Kim
Sunggeun Han
Jung-Ho Um
Kyongseok Park
机构
[1] Korea Institute of Science and Technology Information,Research Data Hub Center
[2] Korea Institute of Science and Technology Information,KISTI Scientific Data School
[3] Korea Institute of Science and Technology Information,Super Computing Cloud Center
来源
BMC Bioinformatics | / 19卷
关键词
Peptide identification; Tide; Cross-correlation score function; High performance computing; PTM search;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] CROSS-CORRELATION FUNCTIONS IN PROTEIN DYNAMICS AND FUNCTION
    EVANS, MW
    JOURNAL OF MOLECULAR LIQUIDS, 1989, 41 : 223 - 231
  • [22] On the α-μ Cross-Correlation Function: Field Trials and Validation
    Dias, Ugo Silva
    Yacoub, Michel Daoud
    2009 SBMO/IEEE MTT-S INTERNATIONAL MICROWAVE AND OPTOELECTRONICS CONFERENCE (IMOC 2009), 2009, : 316 - 320
  • [23] CROSS-CORRELATION FUNCTION OF A BANDPASS NONLINEAR NETWORK
    DEBOER, E
    PROCEEDINGS OF THE IEEE, 1976, 64 (09) : 1443 - 1444
  • [24] The galaxy-absorber cross-correlation function
    Lanzetta, KM
    Webb, JK
    Barcons, X
    YOUNG UNIVERSE: GALAXY FORMATION AND EVOLUTION AT INTERMEDIATE AND HIGH REDSHIFT, 1998, 146 : 175 - 181
  • [25] CROSS-CORRELATION OF SYSTEM OUTPUTS - AMBIGUITY FUNCTION
    LU, CY
    IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS, 1991, 38 (01): : 131 - 134
  • [26] CROSS-CORRELATION FUNCTION OF 2 PULSE TRAINS
    POTAPOV, AV
    RADIO ENGINEERING AND ELECTRONIC PHYSICS-USSR, 1968, 13 (06): : 977 - &
  • [27] Accelerating digital halftoning using the local exhaustive search on the GPU
    Kouge, Hiroaki
    Honda, Takumi
    Fujita, Toru
    Ito, Yasuaki
    Nakano, Koji
    Bordim, Jacir L.
    CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE, 2017, 29 (02):
  • [28] Fast 3D motif search of EM density maps using a locally normalized cross-correlation function
    Rath, BK
    Hegerl, R
    Leith, A
    Shaikh, TR
    Wagenknecht, T
    Frank, J
    JOURNAL OF STRUCTURAL BIOLOGY, 2003, 144 (1-2) : 95 - 103
  • [29] CROSS-CORRELATION ANALYSER USING A PRBS
    WILSON, H
    ELECTRONIC ENGINEERING, 1969, 41 (495): : 66 - &
  • [30] Real-Time Implementation of Stereo Vision Based on Optimised Normalised Cross-Correlation and Propagated Search Range on a GPU
    Fan, Rui
    Dahnoun, Naim
    2017 IEEE INTERNATIONAL CONFERENCE ON IMAGING SYSTEMS AND TECHNIQUES (IST), 2017, : 241 - 246