Three-dimensional modeling of chromatin structure from interaction frequency data using Markov chain Monte Carlo sampling

被引:0
|
作者
Mathieu Rousseau
James Fraser
Maria A Ferraiuolo
Josée Dostie
Mathieu Blanchette
机构
[1] Bellini Building,McGill Centre for Bioinformatics
[2] Life Sciences Complex,Department of Biochemistry, and Goodman Cancer Research Centre
[3] McGill University,undefined
来源
关键词
Markov Chain Monte Carlo; Base Density; Interaction Frequency; Markov Chain Monte Carlo Sampling; HoxA Cluster;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [41] In situ learning using intrinsic memristor variability via Markov chain Monte Carlo sampling
    Thomas Dalgaty
    Niccolo Castellani
    Clément Turck
    Kamel-Eddine Harabi
    Damien Querlioz
    Elisa Vianello
    Nature Electronics, 2021, 4 : 151 - 161
  • [42] In situ learning using intrinsic memristor variability via Markov chain Monte Carlo sampling
    Dalgaty, Thomas
    Castellani, Niccolo
    Turck, Clement
    Harabi, Kamel-Eddine
    Querlioz, Damien
    Vianello, Elisa
    NATURE ELECTRONICS, 2021, 4 (02) : 151 - 161
  • [43] Generalized likelihood uncertainty estimation (GLUE) using adaptive Markov chain Monte Carlo sampling
    Blasone, Roberta-Serena
    Vrugt, Jasper A.
    Madsen, Henrik
    Rosbjerg, Dan
    Robinson, Bruce A.
    Zyvoloski, George A.
    ADVANCES IN WATER RESOURCES, 2008, 31 (04) : 630 - 648
  • [44] MCMC-ODPR: Primer design optimization using Markov Chain Monte Carlo sampling
    James L Kitchen
    Jonathan D Moore
    Sarah A Palmer
    Robin G Allaby
    BMC Bioinformatics, 13
  • [45] MCMC-ODPR: Primer design optimization using Markov Chain Monte Carlo sampling
    Kitchen, James L.
    Moore, Jonathan D.
    Palmer, Sarah A.
    Allaby, Robin G.
    BMC BIOINFORMATICS, 2012, 13
  • [46] Reliability Estimation Using Markov Chain Monte Carlo-Based Tail Modeling
    Bayrak, Gamze
    Acar, Erdem
    AIAA JOURNAL, 2018, 56 (03) : 1211 - 1224
  • [47] Three-dimensional sampling of material structure for property modeling and design
    Echlin M.L.P.
    Lenthe W.C.
    Pollock T.M.
    Integrating Materials and Manufacturing Innovation, 2014, 3 (1) : 278 - 291
  • [48] Estimation of Reservoir Fracture Properties from Seismic Data Using Markov Chain Monte Carlo Methods
    Feng, Runhai
    Mosegaard, Klaus
    Mukerji, Tapan
    Grana, Dario
    MATHEMATICAL GEOSCIENCES, 2024, 56 (06) : 1161 - 1184
  • [49] Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
    Job Dekker
    Marc A. Marti-Renom
    Leonid A. Mirny
    Nature Reviews Genetics, 2013, 14 : 390 - 403
  • [50] Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
    Dekker, Job
    Marti-Renom, Marc A.
    Mirny, Leonid A.
    NATURE REVIEWS GENETICS, 2013, 14 (06) : 390 - 403