estimateR: an R package to estimate and monitor the effective reproductive number

被引:0
|
作者
Jérémie Scire
Jana S. Huisman
Ana Grosu
Daniel C. Angst
Adrian Lison
Jinzhou Li
Marloes H. Maathuis
Sebastian Bonhoeffer
Tanja Stadler
机构
[1] ETH Zurich,Department of Biosystems Science and Engineering
[2] Swiss Federal Institute of Technology,Department of Environmental Systems Science
[3] Swiss Institute of Bioinformatics,Department of Physics
[4] ETH Zurich,Department of Mathematics
[5] Swiss Federal Institute of Technology,undefined
[6] Massachusetts Institute of Technology,undefined
[7] ETH Zurich,undefined
[8] Swiss Federal Institute of Technology,undefined
来源
关键词
R package; Epidemiology; Effective reproductive number; Re; Rt; Surveillance; Monitoring; Outbreak; COVID-19;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [41] Sequential estimate for linear regression models with uncertain number of effective variables
    Wang, Zhanfeng
    Chang, Yuan-chin Ivan
    METRIKA, 2013, 76 (07) : 949 - 978
  • [42] Sequential estimate for generalized linear models with uncertain number of effective variables
    Haibo Lu
    Zhanfeng Wang
    Yaohua Wu
    Journal of Systems Science and Complexity, 2015, 28 : 424 - 438
  • [43] Methods to Estimate the Between-Population Level Effective Reproductive Number for Infectious Disease Epidemics: Foot-And-Mouth Disease (FMD) in Vietnam
    Gunasekera, Umanga
    Vanderwaal, Kimberly
    Arzt, Jonathan
    Perez, Andres
    TRANSBOUNDARY AND EMERGING DISEASES, 2024, 2024
  • [44] BayesSPsurv: An R Package to Estimate Bayesian (Spatial) Split-Population Survival Models
    Bolte, Brandon
    Schmidt, Nicolds
    Bejar, Sergio
    Huynh, Nguyen
    Mukherjee, Bumba
    R JOURNAL, 2021, 13 (01): : 595 - 613
  • [45] lcc: an R package to estimate the concordance correlation, Pearson correlation and accuracy over time
    Oliveira, Thiago P.
    Moral, Rafael A.
    Zocchi, Silvio S.
    Demetrio, Clarice G. B.
    Hinde, John
    PEERJ, 2020, 8
  • [46] iccCounts: An R Package to Estimate the Intraclass Correlation Coefficient for Assessing Agreement with Count Data
    Carrasco, Josep L.
    R JOURNAL, 2022, 14 (02): : 229 - 243
  • [47] An R package of maximum entropy production model to estimate 41 years of global evapotranspiration
    Yang, Yong
    Sun, Huaiwei
    Zhu, Modi
    Wang, Jingfeng
    Zhang, Wenxin
    JOURNAL OF HYDROLOGY, 2022, 614
  • [48] climateStability: AN R PACKAGE TO ESTIMATE CLIMATE STABILITY FROM TIME-SLICE CLIMATOLOGIES
    Owens, Hannah L.
    Guralnick, Robert P.
    BIODIVERSITY INFORMATICS, 2019, 14 : 8 - 13
  • [49] chromploid: An R package for chromosome number evolution across the plant tree of life
    Zenil-Ferguson, Rosana
    Burleigh, J. Gordon
    Ponciano, Jose Miguel
    APPLICATIONS IN PLANT SCIENCES, 2018, 6 (03):
  • [50] A pitfall in estimating the effective reproductive number Rt for COVID-19
    Markus, Petermann
    Daniel, Wyler
    SWISS MEDICAL WEEKLY, 2020, 150