Information gains from Monte Carlo Markov Chains

被引:0
|
作者
Ahmad Mehrabi
A. Ahmadi
机构
[1] Bu-Ali Sina University,Department of Physics
关键词
D O I
暂无
中图分类号
学科分类号
摘要
In this paper, we present a novel method to compute the relative entropy as well as the expected relative entropy using an MCMC chain. The relative entropy from information theory can be used to quantify differences in posterior distributions of a pair of experiments. In cosmology, the relative entropy has been proposed as an interesting tool for model selection, experiment design, forecasting and measuring information gain from subsequent experiments. In contrast to Gaussian distributions, these quantities are not available analytically and one needs to use numerical methods to estimate them which are computationally very expensive. We propose a method and provide its python package to estimate the relative entropy as well as expected relative entropy from an MCMC sample. We consider the linear Gaussian model to check the accuracy of our code. Our results indicate that the relative error is below 0.2% for sample size larger than 105\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$10^5$$\end{document} in the linear Gaussian model. In addition, we study the robustness of our code in estimating the expected relative entropy in the Gaussian case.
引用
收藏
相关论文
共 50 条
  • [41] Bayesian models for medical image biology using Monte Carlo Markov chains techniques
    Zimeras, S
    Gerogiakodis, F
    MATHEMATICAL AND COMPUTER MODELLING, 2005, 42 (7-8) : 759 - 768
  • [42] Accurate Monte Carlo estimation of very small p-values in Markov chains
    Wilbur, WJ
    COMPUTATIONAL STATISTICS, 1998, 13 (02) : 153 - 168
  • [43] Monte Carlo method for solving systems of linear algebraic equations with minimum Markov chains
    Taft, K
    Fathi-Vajargah, B
    PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON PARALLEL AND DISTRIBUTED PROCESSING TECHNIQUES AND APPLICATIONS, VOLS I-V, 2000, : 291 - 296
  • [44] Verification of Calculations of Non-Homogeneous Markov Chains Using Monte Carlo Simulation
    Reznicek, Jan
    Kohlik, Martin
    Kubatova, Hana
    2022 25TH EUROMICRO CONFERENCE ON DIGITAL SYSTEM DESIGN (DSD), 2022, : 689 - 695
  • [45] Randomized quasi-Monte Carlo simulation of Markov chains with an ordered state space
    L'Ecuyer, P
    Lécot, C
    Tuffin, B
    MONTE CARLO AND QUASI-MONTE CARLO METHODS 2004, 2006, : 331 - +
  • [46] Probabilistic simulation of batch tray drying using Markov chains and the Monte Carlo technique
    Cronin, K
    JOURNAL OF FOOD PROCESS ENGINEERING, 1998, 21 (06) : 459 - 483
  • [47] Sampling from complicated and unknown distributions Monte Carlo and Markov Chain Monte Carlo methods for redistricting
    Cho, Wendy K. Tam
    Liu, Yan Y.
    PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2018, 506 : 170 - 178
  • [48] Information-Geometric Markov Chain Monte Carlo Methods Using Diffusions
    Livingstone, Samuel
    Girolami, Mark
    ENTROPY, 2014, 16 (06): : 3074 - 3102
  • [49] Population Markov Chain Monte Carlo
    Laskey, KB
    Myers, JW
    MACHINE LEARNING, 2003, 50 (1-2) : 175 - 196
  • [50] Monte Carlo integration with Markov chain
    Tan, Zhiqiang
    JOURNAL OF STATISTICAL PLANNING AND INFERENCE, 2008, 138 (07) : 1967 - 1980