New Docking Algorithm Based on Fuzzy Set Theory

被引:0
|
作者
Thomas E. Exner
Jürgen Brickmann
机构
[1] Department of Physical Chemistry,
[2] Darmstadt University of Technology,undefined
[3] D-64287 Darmstadt,undefined
[4] Germany (brick@pc.chemie.th-darmstadt.de),undefined
[5] Darmstadt Center of Scientific Computing,undefined
[6] D-64287 Darmstadt,undefined
[7] Germany,undefined
来源
关键词
Keywords: Protein-protein-docking; Shape complementarity; Fuzzy Set Theory;
D O I
暂无
中图分类号
学科分类号
摘要
A new docking algorithm based on shape complementarity is presented. The algorithm is based on Fuzzy Logic strategies. A small number of possible docking configurations is selected using partial ordering of a fuzzy measure of topographical properties between complementary surface patches. The algorithm was tested with the structures of three protein-protein-complexes of serin proteases. In one case the components determined separately by x-ray investigations whereas in the other cases the components obtained from the known complex structure were used.
引用
收藏
页码:321 / 324
页数:3
相关论文
共 50 条
  • [21] A Medical Image Enhancement Algorithm Based on Fuzzy Set Theory and Its GUI Implementation
    He, Wen
    PROCEEDINGS OF THE 2016 JOINT INTERNATIONAL INFORMATION TECHNOLOGY, MECHANICAL AND ELECTRONIC ENGINEERING, 2016, 59 : 86 - 90
  • [22] A Lane Extraction Algorithm Based on Fuzzy Set
    Bai, Yuxiu
    Zheng, Huanhuan
    Zhou, Jian
    Zhou, Dongmei
    MATHEMATICAL PROBLEMS IN ENGINEERING, 2021, 2021
  • [23] A NEW METHOD OF EXCITATION CONTROL-BASED ON FUZZY SET-THEORY
    HANDSCHIN, E
    HOFFMANN, W
    REYER, F
    STEPHANBLOME, T
    SCHLUCKING, U
    WESTERMANN, D
    AHMED, SS
    IEEE TRANSACTIONS ON POWER SYSTEMS, 1994, 9 (01) : 533 - 539
  • [24] A new algorithm for applying fuzzy set theory to evaluate the rate of aggregative risk in software development
    Lee, HM
    Lee, SY
    Lee, TY
    Chen, JJ
    INFORMATION SCIENCES, 2003, 153 : 177 - 197
  • [25] Supplier Selection based on Fuzzy Set Theory
    Chen, Ke
    Zhang, Xin
    Yin, Fan
    ICPOM2008: PROCEEDINGS OF 2008 INTERNATIONAL CONFERENCE OF PRODUCTION AND OPERATION MANAGEMENT, VOLUMES 1-3, 2008, : 576 - 579
  • [26] Fuzzy Set Operation Based on Measure Theory
    Lu Jianping (Department of Computer
    TheJournalofChinaUniversitiesofPostsandTelecommunications, 1997, (02) : 24 - 29
  • [27] Evaluation of Trustworthiness based on Fuzzy Set Theory
    Sun, Hua
    Yu, Jiong
    Zhang, ZhenYu
    Li, Li
    Liao, Bin
    INTERNATIONAL JOURNAL OF FUTURE GENERATION COMMUNICATION AND NETWORKING, 2014, 7 (02): : 89 - 101
  • [28] FUZZY SET THEORY BASED STUDENT EVALUATION
    Johanyak, Zsolt Csaba
    IJCCI 2009: PROCEEDINGS OF THE INTERNATIONAL JOINT CONFERENCE ON COMPUTATIONAL INTELLIGENCE, 2009, : 53 - 58
  • [29] A New Gene Selection Algorithm using Fuzzy-Rough Set Theory for Tumor Classification
    Farahbakhshian, Seyedeh Faezeh
    Ahvanooey, Milad Taleby
    CONTROL ENGINEERING AND APPLIED INFORMATICS, 2020, 22 (01): : 14 - 23
  • [30] A New Fuzzy Set Theory Satisfying All Classical Set Formulas
    Gao, Qing-Shi
    Gao, Xiao-Yu
    Hu, Yue
    JOURNAL OF COMPUTER SCIENCE AND TECHNOLOGY, 2009, 24 (04) : 798 - 804