Sex- and developmental-specific transcriptomic analyses of the Antarctic mite, Alaskozetes antarcticus, reveal transcriptional shifts underlying oribatid mite reproduction

被引:0
|
作者
Hannah E. Meibers
Geoffrey Finch
Robert T. Gregg
Sierra Glenn
Keavash D. Assani
Emily C. Jennings
Benjamin Davies
Andrew J. Rosendale
Christopher J. Holmes
J. D. Gantz
Drew E. Spacht
Richard E. Lee
David L. Denlinger
Matthew T. Weirauch
Joshua B. Benoit
机构
[1] University of Cincinnati,Department of Biological Sciences
[2] Miami University,Department of Biology
[3] The Ohio State University,Departments of Entomology and Evolution, Ecology and Organismal Biology
[4] Cincinnati Children’s Hospital Medical Center,Center for Autoimmune Genomics and Etiology and Divisions of Biomedical Informatics and Developmental Biology
[5] University of Cincinnati College of Medicine,Department of Pediatrics
来源
Polar Biology | 2019年 / 42卷
关键词
RNA-seq; Reproduction; Testis-specific serine/threonine protein kinases; Mite; Antarctic reproductive biology;
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学科分类号
摘要
The oribatid mite Alaskozetes antarcticus, one of the most abundant terrestrial invertebrates in Antarctica, survives extreme temperature fluctuation and desiccation, and thrives in the short growing season characteristic of this polar environment. Several aspects of the mite’s ecology and physiology are well studied, but little is known about its reproduction. In this study, we utilize sex- and development-specific next-generation RNA-sequencing (RNA-seq) analyses to identify differentially regulated transcripts underlying reproduction of A. antarcticus. Pairwise comparisons between males, females, and tritonymphs revealed more than 4000 enriched transcripts based on different transcriptional levels among sexes and developmental stages. More than 500 of these enriched transcripts were differentially upregulated over 1000-fold. Many of the highly enriched and sex-specific transcripts were previously uncharacterized or have no known orthology. Of the transcripts identified, gene ontology-based analyses linked the transcriptional distinctions to differences in reproduction, chemosensation, and stress response. Our comparative approach allowed us to determine sexually dimorphic transcript expression in A. antarcticus. We anticipate that this study will provide a baseline to better understand the mechanisms that underlie reproduction in both polar and non-polar oribatid mites.
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页码:357 / 370
页数:13
相关论文
共 3 条
  • [1] Sex- and developmental-specific transcriptomic analyses of the Antarctic mite, Alaskozetes antarcticus, reveal transcriptional shifts underlying oribatid mite reproduction
    Meibers, Hannah E.
    Finch, Geoffrey
    Gregg, Robert T.
    Glenn, Sierra
    Assani, Keavash D.
    Jennings, Emily C.
    Davies, Benjamin
    Rosendale, Andrew J.
    Holmes, Christopher J.
    Gantz, J. D.
    Spacht, Drew E.
    Lee, Richard E., Jr.
    Denlinger, David L.
    Weirauch, Matthew T.
    Benoit, Joshua B.
    POLAR BIOLOGY, 2019, 42 (02) : 357 - 370
  • [2] Latitudinal variation in allocation to reproduction by the Antarctic oribatid mite, Alaskozetes antarcticus
    Convey, P
    APPLIED SOIL ECOLOGY, 1998, 9 (1-3) : 93 - 99