Sex- and developmental-specific transcriptomic analyses of the Antarctic mite, Alaskozetes antarcticus, reveal transcriptional shifts underlying oribatid mite reproduction

被引:6
|
作者
Meibers, Hannah E. [1 ]
Finch, Geoffrey [1 ]
Gregg, Robert T. [1 ]
Glenn, Sierra [1 ]
Assani, Keavash D. [1 ]
Jennings, Emily C. [1 ]
Davies, Benjamin [1 ]
Rosendale, Andrew J. [1 ]
Holmes, Christopher J. [1 ]
Gantz, J. D. [2 ]
Spacht, Drew E. [3 ,4 ]
Lee, Richard E., Jr. [2 ]
Denlinger, David L. [3 ,4 ]
Weirauch, Matthew T. [5 ,6 ,7 ,8 ]
Benoit, Joshua B. [1 ]
机构
[1] Univ Cincinnati, Dept Biol Sci, Cincinnati, OH 45221 USA
[2] Miami Univ, Dept Biol, Oxford, OH 45056 USA
[3] Ohio State Univ, Dept Entomol, 1735 Neil Ave, Columbus, OH 43210 USA
[4] Ohio State Univ, Dept Evolut Ecol & Organismal Biol, Columbus, OH 43210 USA
[5] Cincinnati Childrens Hosp Med Ctr, Ctr Autoimmune Genom & Etiol, Cincinnati, OH 45229 USA
[6] Cincinnati Childrens Hosp Med Ctr, Div Biomed Informat, Cincinnati, OH 45229 USA
[7] Cincinnati Childrens Hosp Med Ctr, Div Dev Biol, Cincinnati, OH 45229 USA
[8] Univ Cincinnati, Coll Med, Dept Pediat, Cincinnati, OH USA
基金
美国农业部; 美国国家科学基金会;
关键词
RNA-seq; Reproduction; Testis-specific serine; threonine protein kinases; Mite; Antarctic reproductive biology; AMERONOTHRUS-LINEATUS ACARI; SEMINAL FLUID PROTEINS; RNA-SEQ; LIFE-CYCLE; DERMATOPHAGOIDES-FARINAE; TETRANYCHUS-URTICAE; GENE-EXPRESSION; ADULT SURVIVAL; IDENTIFICATION; GENOME;
D O I
10.1007/s00300-018-2427-x
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
The oribatid mite Alaskozetes antarcticus, one of the most abundant terrestrial invertebrates in Antarctica, survives extreme temperature fluctuation and desiccation, and thrives in the short growing season characteristic of this polar environment. Several aspects of the mite's ecology and physiology are well studied, but little is known about its reproduction. In this study, we utilize sex- and development-specific next-generation RNA-sequencing (RNA-seq) analyses to identify differentially regulated transcripts underlying reproduction of A. antarcticus. Pairwise comparisons between males, females, and tritonymphs revealed more than 4000 enriched transcripts based on different transcriptional levels among sexes and developmental stages. More than 500 of these enriched transcripts were differentially upregulated over 1000-fold. Many of the highly enriched and sex-specific transcripts were previously uncharacterized or have no known orthology. Of the transcripts identified, gene ontology-based analyses linked the transcriptional distinctions to differences in reproduction, chemosensation, and stress response. Our comparative approach allowed us to determine sexually dimorphic transcript expression in A. antarcticus. We anticipate that this study will provide a baseline to better understand the mechanisms that underlie reproduction in both polar and non-polar oribatid mites.
引用
收藏
页码:357 / 370
页数:14
相关论文
共 3 条
  • [1] Sex- and developmental-specific transcriptomic analyses of the Antarctic mite, Alaskozetes antarcticus, reveal transcriptional shifts underlying oribatid mite reproduction
    Hannah E. Meibers
    Geoffrey Finch
    Robert T. Gregg
    Sierra Glenn
    Keavash D. Assani
    Emily C. Jennings
    Benjamin Davies
    Andrew J. Rosendale
    Christopher J. Holmes
    J. D. Gantz
    Drew E. Spacht
    Richard E. Lee
    David L. Denlinger
    Matthew T. Weirauch
    Joshua B. Benoit
    Polar Biology, 2019, 42 : 357 - 370
  • [2] Latitudinal variation in allocation to reproduction by the Antarctic oribatid mite, Alaskozetes antarcticus
    Convey, P
    APPLIED SOIL ECOLOGY, 1998, 9 (1-3) : 93 - 99