The peach genome

被引:0
|
作者
Pere Arús
Ignazio Verde
Bryon Sosinski
Tatyana Zhebentyayeva
Albert G. Abbott
机构
[1] IRTA–Centre de Recerca en Agrigenòmica (CSIC-IRTA-UAB-UB),Agricultural Research Council (CRA)
[2] Fruit Tree Research Center,Department of Horticultural Science
[3] North Carolina State University,Department of Biochemistry and Genetics
[4] Clemson University,undefined
来源
Tree Genetics & Genomes | 2012年 / 8卷
关键词
Genomics; Breeding; Map; Sequence;
D O I
暂无
中图分类号
学科分类号
摘要
The peach [Prunus persica (L.) Batsch] genome sequence has been recently made available to the scientific community. This represents the culmination of a long process that started less than two decades ago with the release of the first marker-based linkage maps. The process has advanced rapidly with the studies of molecular diversity, detection of genome positions of major genes and quantitative trait loci, development of large DNA sequence collections, transcriptome and proteome analyses, comparative genomic studies, construction of a physical map, and development of databases where researchers can access information. The growth of genomics knowledge has been partly due to the simplicity of the peach genome: short (230 Mbp), diploid, and distributed on eight pairs of chromosomes. Its unusually short intergeneration period (2–4 years) and selfing mating behavior, plus a dynamic peach scientific community that has often collaborated in the development of the necessary tools, have also facilitated in constructing a robust sequence of its complete genome. Peach is one of the best known species genetically among tree crops, with the promise of rapid advancement in the next few years. This paper reviews the resources available and the main results obtained, with emphasis placed on application to the development of improved varieties.
引用
收藏
页码:531 / 547
页数:16
相关论文
共 50 条
  • [31] The complete chloroplast genome of Amygdalus mira (Rosaceae) a threatened wild Chinese peach
    Amar, Mohamed Hamdy
    Magdy, Mahmoud
    Zhou, Hui
    Wang, Lu
    Han, Yuepeng
    CONSERVATION GENETICS RESOURCES, 2018, 10 (04) : 801 - 803
  • [32] Peach chloroplast genome variation architecture and phylogenomic signatures of cpDNA introgression in Prunus
    Amar, Mohamed Hamdy
    Magdy, Mahmoud
    Wang, Lu
    Zhou, Hui
    Zheng, Beibei
    Jiang, Xiaohan
    Atta, Aiman H.
    Han, Yuepeng
    CANADIAN JOURNAL OF PLANT SCIENCE, 2019, 99 (06) : 885 - 896
  • [33] Genome re-sequencing reveals the evolutionary history of peach fruit edibility
    Yang Yu
    Jun Fu
    Yaoguang Xu
    Jiewei Zhang
    Fei Ren
    Hongwei Zhao
    Shilin Tian
    Wei Guo
    Xiaolong Tu
    Jing Zhao
    Dawei Jiang
    Jianbo Zhao
    Weiying Wu
    Gaochao Wang
    Rongcai Ma
    Quan Jiang
    Jianhua Wei
    Hua Xie
    Nature Communications, 9
  • [34] Genome re-sequencing reveals the evolutionary history of peach fruit edibility
    Yu, Yang
    Fu, Jun
    Xu, Yaoguang
    Zhang, Jiewei
    Ren, Fei
    Zhao, Hongwei
    Tian, Shilin
    Guo, Wei
    Tu, Xiaolong
    Zhao, Jing
    Jiang, Dawei
    Zhao, Jianbo
    Wu, Weiying
    Wang, Gaochao
    Ma, Rongcai
    Jiang, Quan
    Wei, Jianhua
    Xie, Hua
    NATURE COMMUNICATIONS, 2018, 9
  • [35] Genetic Diversity and Genome-Wide Association Study of Morphological and Quality Traits in Peach Using Two Spanish Peach Germplasm Collections
    Mas-Gomez, Jorge
    Cantin, Celia M.
    Moreno, Maria Angeles
    Martinez-Garcia, Pedro J.
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [36] Detection and application of genome-wide variations in peach for association and genetic relationship analysis
    Liping Guan
    Ke Cao
    Yong Li
    Jian Guo
    Qiang Xu
    Lirong Wang
    BMC Genetics, 20
  • [37] Genome-wide identification, expression, and interaction analysis for ovate family proteins in peach
    Li, Huifeng
    Dong, Qinglong
    Zhu, Xiaoping
    Zhao, Qiang
    Ran, Kun
    MOLECULAR BIOLOGY REPORTS, 2019, 46 (04) : 3755 - 3764
  • [38] An integrated peach genome structural variation map uncovers genes associated with fruit traits
    Guo, Jian
    Cao, Ke
    Deng, Cecilia
    Li, Yong
    Zhu, Gengrui
    Fang, Weichao
    Chen, Changwen
    Wang, Xinwei
    Wu, Jinlong
    Guan, Liping
    Wu, Shan
    Guo, Wenwu
    Yao, Jia-Long
    Fei, Zhangjun
    Wang, Lirong
    GENOME BIOLOGY, 2020, 21 (01)
  • [39] Genome-wide identification of phospholipase C related to chilling injury in peach fruit
    Ke Wang
    Ya-li Li
    Shuqi Chen
    Journal of Plant Biochemistry and Biotechnology, 2021, 30 : 452 - 461
  • [40] An integrated peach genome structural variation map uncovers genes associated with fruit traits
    Jian Guo
    Ke Cao
    Cecilia Deng
    Yong Li
    Gengrui Zhu
    Weichao Fang
    Changwen Chen
    Xinwei Wang
    Jinlong Wu
    Liping Guan
    Shan Wu
    Wenwu Guo
    Jia-Long Yao
    Zhangjun Fei
    Lirong Wang
    Genome Biology, 21