Mechanism of phase condensation for chromosome architecture and function

被引:4
|
作者
Park, Jeongveen [1 ]
Kim, Jeong-Jun [1 ]
Ryu, Je-Kyung [1 ,2 ,3 ,4 ,5 ]
机构
[1] Seoul Natl Univ, Dept Phys & Astron, Seoul 08826, South Korea
[2] Seoul Natl Univ, Inst Appl Phys, Seoul 08826, South Korea
[3] Seoul Natl Univ, Inst Mol Biol & Genet, Seoul 08826, South Korea
[4] Seoul Natl Univ, Dept Biol Sci, Seoul 08826, South Korea
[5] Seoul Natl Univ, Interdisciplinary Program Neurosci, Seoul 08826, South Korea
来源
EXPERIMENTAL AND MOLECULAR MEDICINE | 2024年 / 56卷 / 04期
基金
新加坡国家研究基金会;
关键词
CHROMATIN ORGANIZATION; TRANSCRIPTION FACTORS; SEPARATION; DNA; PROTEIN; GENE; COMPACTION; DOMAINS; TRANSITIONS; SEGREGATION;
D O I
10.1038/s12276-024-01226-x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Chromosomal phase separation is involved in a broad spectrum of chromosome organization and functional processes. Nonetheless, the intricacy of this process has left its molecular mechanism unclear. Here, we introduce the principles governing phase separation and its connections to physiological roles in this context. Our primary focus is contrasting two phase separation mechanisms: self-association-induced phase separation (SIPS) and bridging-induced phase separation (BIPS). We provide a comprehensive discussion of the distinct features characterizing these mechanisms and offer illustrative examples that suggest their broad applicability. With a detailed understanding of these mechanisms, we explore their associations with nucleosomes and chromosomal biological functions. This comprehensive review contributes to the exploration of uncharted territory in the intricate interplay between chromosome architecture and function. Chromosomal phase separation, a process where a mixture splits into two separate parts, is important for various chromosomal functions (activities of chromosomes, the part of a cell that carries genetic information). However, understanding this process requires knowledge of polymer physics (the study of large, complex molecules). This study by Ryu and colleagues explores the patterns behind the molecular mechanisms (processes at a microscopic level) of chromosomal phase separations. The researchers reviewed the role of proteins and DNA molecules in this process. They discovered two distinct working models, Bridging-Induced Phase Separation (BIPS) and Self-association Induced Phase Separation (SIPS), are involved. The study concludes that the mechanism of chromosomal phase separation relies on the dynamics of proteins. This research enhances our understanding of chromosomal functions and could impact future studies in biological sciences.This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
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页码:809 / 819
页数:11
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